RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 IL36AQ9UHA7 158 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 SOCS5O75159 536 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 PPFIA2O75334 1257 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 LEFTY1O75610 366 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 PGLSO95336 258 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 KLF8O95600 359 aaPredicted RBP21.69■■□□□ 1.06
TPM1-204ENST00000334895 UGT2B4P06133 528 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 MLNP12872 115 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 SERPINA4P29622 427 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 CBLBQ13191 982 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 FZD5Q13467 585 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 ELAVL3Q14576 367 aaKnown RBP21.69■■□□□ 1.06
TPM1-204ENST00000334895 ARSIQ5FYB1 569 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 PKN3Q6P5Z2 889 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 TXNDC5Q8NBS9 432 aaKnown RBP21.69■■□□□ 1.06
TPM1-204ENST00000334895 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.69■■□□□ 1.06
TPM1-204ENST00000334895 ECHDC3Q96DC8 303 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 IFT43Q96FT9 208 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 FRMD8Q9BZ67 464 aaPredicted RBP21.69■■□□□ 1.06
TPM1-204ENST00000334895 FOXP3Q9BZS1 431 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 LTB4R2Q9NPC1 389 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 SARDHQ9UL12 918 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 PCDHB9Q9Y5E1 797 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 E7ESA3 106 aa21.68■■□□□ 1.06
TPM1-204ENST00000334895 NDST3O95803 873 aa21.68■■□□□ 1.06
TPM1-204ENST00000334895 ARL4CP56559 192 aa21.68■■□□□ 1.06
TPM1-204ENST00000334895 SARNPP82979 210 aaKnown RBP21.68■■□□□ 1.06
TPM1-204ENST00000334895 RAD51Q06609 339 aa21.68■■□□□ 1.06
TPM1-204ENST00000334895 CDH17Q12864 832 aa21.68■■□□□ 1.06
TPM1-204ENST00000334895 MSLNQ13421 630 aaPredicted RBP21.68■■□□□ 1.06
TPM1-204ENST00000334895 CAMK2GQ13555 558 aaPredicted RBP21.68■■□□□ 1.06
TPM1-204ENST00000334895 KIAA1211LQ6NV74 962 aa21.68■■□□□ 1.06
TPM1-204ENST00000334895 Q6ZS52 159 aa21.68■■□□□ 1.06
TPM1-204ENST00000334895 RPLP0P6Q8NHW5 317 aa21.68■■□□□ 1.06
TPM1-204ENST00000334895 PDCD6IPQ8WUM4 868 aaKnown RBP21.68■■□□□ 1.06
TPM1-204ENST00000334895 OR8D1Q8WZ84 308 aa21.68■■□□□ 1.06
TPM1-204ENST00000334895 SMIM14Q96QK8 99 aa21.68■■□□□ 1.06
TPM1-204ENST00000334895 FOXQ1Q9C009 403 aa21.68■■□□□ 1.06
TPM1-204ENST00000334895 SUV39H2Q9H5I1 410 aa21.68■■□□□ 1.06
TPM1-204ENST00000334895 CD248Q9HCU0 757 aa21.68■■□□□ 1.06
TPM1-204ENST00000334895 PPM1HQ9ULR3 514 aa21.68■■□□□ 1.06
TPM1-204ENST00000334895 ARIH1Q9Y4X5 557 aaPredicted RBP21.68■■□□□ 1.06
TPM1-204ENST00000334895 KANSL1LA0AUZ9 987 aa21.67■■□□□ 1.06
TPM1-204ENST00000334895 TPH1P17752 444 aa21.67■■□□□ 1.06
TPM1-204ENST00000334895 HLA-DPA1P20036 260 aa21.67■■□□□ 1.06
TPM1-204ENST00000334895 COL9A1P20849 921 aa21.67■■□□□ 1.06
TPM1-204ENST00000334895 SESN2P58004 480 aaPredicted RBP21.67■■□□□ 1.06
TPM1-204ENST00000334895 DHX9Q08211 1270 aaKnown RBP21.67■■□□□ 1.06
TPM1-204ENST00000334895 SIGLEC14Q08ET2 396 aa21.67■■□□□ 1.06
TPM1-204ENST00000334895 GRM3Q14832 879 aa21.67■■□□□ 1.06
TPM1-204ENST00000334895 FASTKD3Q14CZ7 662 aaKnown RBP21.67■■□□□ 1.06
TPM1-204ENST00000334895 ARMC12Q5T9G4 340 aa21.67■■□□□ 1.06
TPM1-204ENST00000334895 GDPD4Q6W3E5 623 aa21.67■■□□□ 1.06
TPM1-204ENST00000334895 CCDC25Q86WR0 208 aa21.67■■□□□ 1.06
TPM1-204ENST00000334895 PDIK1LQ8N165 341 aa21.67■■□□□ 1.06
TPM1-204ENST00000334895 MPP5Q8N3R9 675 aa21.67■■□□□ 1.06
TPM1-204ENST00000334895 DNAAF3Q8N9W5 541 aa21.67■■□□□ 1.06
TPM1-204ENST00000334895 LPCAT1Q8NF37 534 aa21.67■■□□□ 1.06
TPM1-204ENST00000334895 PIH1D2Q8WWB5 315 aa21.67■■□□□ 1.06
TPM1-204ENST00000334895 SHDQ96IW2 340 aa21.67■■□□□ 1.06
TPM1-204ENST00000334895 ZNF641Q96N77 438 aaPredicted RBP21.67■■□□□ 1.06
TPM1-204ENST00000334895 TXLNGYQ9BZA5 131 aa21.67■■□□□ 1.06
TPM1-204ENST00000334895 A0A1W2PQF6 199 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 ALOX15BO15296 676 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 MGAT1P26572 445 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 METAP1P53582 386 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 PDIA2Q13087 525 aaKnown RBP21.66■■□□□ 1.06
TPM1-204ENST00000334895 BRD3Q15059 726 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 BBS9Q3SYG4 887 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 HP1BP3Q5SSJ5 553 aaPredicted RBP21.66■■□□□ 1.06
TPM1-204ENST00000334895 CERCAMQ5T4B2 595 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 IGDCC3Q8IVU1 814 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 SPOCK2Q92563 424 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 LRIG1Q96JA1 1093 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 SIGLEC10Q96LC7 697 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 KLHL32Q96NJ5 620 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 PHACTR1Q9C0D0 580 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 POLR3BQ9NW08 1133 aaPredicted RBP21.66■■□□□ 1.06
TPM1-204ENST00000334895 CCDC151A5D8V7 595 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 FGF1P05230 155 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 H2AFXP16104 143 aaPredicted RBP21.66■■□□□ 1.06
TPM1-204ENST00000334895 CA4P22748 312 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 SLC8A1P32418 973 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 CRADDP78560 199 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 UBXN2BQ14CS0 331 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 PTPRRQ15256 657 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 QPCTQ16769 361 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 TRIM67Q6ZTA4 783 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 CENPUQ71F23 418 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 TRMT11Q7Z4G4 463 aaKnown RBP21.66■■□□□ 1.06
TPM1-204ENST00000334895 TMC3Q7Z5M5 1100 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 TMIEQ8NEW7 156 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 TBC1D17Q9HA65 648 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 LMAN1LQ9HAT1 526 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 SAYSD1Q9NPB0 183 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 SYBUQ9NX95 663 aa21.66■■□□□ 1.06
TPM1-204ENST00000334895 MRPS17Q9Y2R5 130 aaKnown RBP21.66■■□□□ 1.06
TPM1-204ENST00000334895 TSPAN11A1L157 253 aa21.65■■□□□ 1.06
TPM1-204ENST00000334895 ANKRD66B4E2M5 251 aa21.65■■□□□ 1.06
TPM1-204ENST00000334895 PRNPP04156 253 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms