RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 CCDC167Q9P0B6 97 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 FBXW11Q9UKB1 542 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 KANSL1LA0AUZ9 987 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 ISM1B1AKI9 464 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.1■□□□□ 0.01
C9orf47-201ENST00000334490 DNM1LO00429 736 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 PER2O15055 1255 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 CDK14O94921 469 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 ALBP02768 609 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 ZNF23P17027 643 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 RPL14P50914 215 aaKnown RBP15.1■□□□□ 0.01
C9orf47-201ENST00000334490 ATXN1P54253 815 aaKnown RBP15.1■□□□□ 0.01
C9orf47-201ENST00000334490 GAD2Q05329 585 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 RIPOR1Q6ZS17 1223 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 ANKS1BQ7Z6G8 1248 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 CRYBG2Q8N1P7 616 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 RTL3Q8N8U3 475 aaKnown RBP15.1■□□□□ 0.01
C9orf47-201ENST00000334490 C16orf70Q9BSU1 422 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 PHPT1Q9NRX4 125 aaPredicted RBP15.1■□□□□ 0.01
C9orf47-201ENST00000334490 EVA1BQ9NVM1 165 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 IMPAD1Q9NX62 359 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 HTRA3P83110 453 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 ELP6Q0PNE2 266 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 LPIN1Q14693 890 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 CRYMQ14894 314 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 TMEM139Q8IV31 216 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 SPATA6LQ8N4H0 392 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 TMEM175Q9BSA9 504 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 KLHL28Q9NXS3 571 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 TCRBV7S2A1N4TA0A589 114 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 PMM2O15305 246 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 KCNE1P15382 129 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 HNF4AP41235 474 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 SLC11A1P49279 550 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 VEGFBP49765 207 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 ATAD3BQ5T9A4 648 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 SLC39A4Q6P5W5 647 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 CYP20A1Q6UW02 462 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 DEFB107AQ8IZN7 70 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 SH3RF2Q8TEC5 729 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 TIFAQ96CG3 184 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 HMCESQ96FZ2 354 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 QRFPRQ96P65 431 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 TWNKQ96RR1 684 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 ACE2Q9BYF1 805 aaPredicted RBP15.1■□□□□ 0.01
C9orf47-201ENST00000334490 RPS6KB2Q9UBS0 482 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 SNX13Q9Y5W8 968 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 PRMT5O14744 637 aaPredicted RBP15.1■□□□□ 0.01
C9orf47-201ENST00000334490 DCXO43602 365 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 VPS4BO75351 444 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 UBOX5O94941 541 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 S100A3P33764 101 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 COLGALT2Q8IYK4 626 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 STX19Q8N4C7 294 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 ZNF655Q8N720 491 aaPredicted RBP15.1■□□□□ 0.01
C9orf47-201ENST00000334490 ATXN2LQ8WWM7 1075 aaKnown RBP15.1■□□□□ 0.01
C9orf47-201ENST00000334490 NKD2Q969F2 451 aaPredicted RBP15.1■□□□□ 0.01
C9orf47-201ENST00000334490 PCYT2Q99447 389 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 MYH2Q9UKX2 1941 aa15.1■□□□□ 0.01
C9orf47-201ENST00000334490 FFAR3O14843 346 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 GPR42O15529 346 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 POU5F2Q8N7G0 328 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 GKN1Q9NS71 199 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 MRPS17Q9Y2R5 130 aaKnown RBP15.09■□□□□ 0.01
C9orf47-201ENST00000334490 BCLAF3A2AJT9 711 aaKnown RBP15.09■□□□□ 0.01
C9orf47-201ENST00000334490 GUCY1B2O75343 617 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 CCND1P24385 295 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 WLSQ5T9L3 541 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 LRRC8BQ6P9F7 803 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 SPATA22Q8NHS9 363 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 LINGO1Q96FE5 620 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 GPR88Q9GZN0 384 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 SLC27A6Q9Y2P4 619 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 FCF1Q9Y324 198 aaKnown RBP15.09■□□□□ 0.01
C9orf47-201ENST00000334490 GLYATL1P3A0A0U1RQE8 302 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 CCDC154A6NI56 674 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 LCA5LO95447 670 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 POP4O95707 220 aaKnown RBP15.09■□□□□ 0.01
C9orf47-201ENST00000334490 UNGP13051 313 aaPredicted RBP15.09■□□□□ 0.01
C9orf47-201ENST00000334490 RRM2P31350 389 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 LRRC23Q53EV4 343 aaPredicted RBP15.09■□□□□ 0.01
C9orf47-201ENST00000334490 MAMDC4Q6UXC1 1216 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 ACMSDQ8TDX5 336 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 PSMG2Q969U7 264 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 SNX6Q9UNH7 406 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 TBC1D30Q9Y2I9 924 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 A0A1W2PQ67 120 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 RASSF9O75901 435 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 USP1O94782 785 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 GJA1P17302 382 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 LBX1P52954 281 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 ATP6V0D1P61421 351 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 SYPL2Q5VXT5 272 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 ZNF621Q6ZSS3 439 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 RASGEF1CQ8N431 466 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 OXNAD1Q96HP4 312 aaPredicted RBP15.09■□□□□ 0.01
C9orf47-201ENST00000334490 QKIQ96PU8 341 aaKnown RBP eCLIP15.09■□□□□ 0.01
C9orf47-201ENST00000334490 SLC25A51Q9H1U9 297 aa15.09■□□□□ 0.01
C9orf47-201ENST00000334490 IMP3Q9NV31 184 aaKnown RBP15.09■□□□□ 0.01
C9orf47-201ENST00000334490 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms