RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 RIMS3Q9UJD0 308 aa11.96□□□□□ -0.49
LIMK2-202ENST00000333611 PCDHGA11Q9Y5H2 935 aa11.96□□□□□ -0.49
LIMK2-202ENST00000333611 SULT1C4O75897 302 aa11.96□□□□□ -0.49
LIMK2-202ENST00000333611 VAPBO95292 243 aa11.96□□□□□ -0.49
LIMK2-202ENST00000333611 VTNP04004 478 aa11.96□□□□□ -0.49
LIMK2-202ENST00000333611 ALDOAP04075 364 aaKnown RBP11.96□□□□□ -0.49
LIMK2-202ENST00000333611 HSPA1AP0DMV8 641 aaKnown RBP11.96□□□□□ -0.49
LIMK2-202ENST00000333611 HSPA1BP0DMV9 641 aaKnown RBP11.96□□□□□ -0.49
LIMK2-202ENST00000333611 GOT1P17174 413 aa11.96□□□□□ -0.49
LIMK2-202ENST00000333611 CRHR1P34998 444 aa11.96□□□□□ -0.49
LIMK2-202ENST00000333611 CCT8P50990 548 aa11.96□□□□□ -0.49
LIMK2-202ENST00000333611 TNFAIP1Q13829 316 aa11.96□□□□□ -0.49
LIMK2-202ENST00000333611 TBCELQ5QJ74 424 aa11.96□□□□□ -0.49
LIMK2-202ENST00000333611 PPP1R26Q5T8A7 1209 aaPredicted RBP11.96□□□□□ -0.49
LIMK2-202ENST00000333611 KIF12Q96FN5 646 aa11.96□□□□□ -0.49
LIMK2-202ENST00000333611 PCYT2Q99447 389 aa11.96□□□□□ -0.49
LIMK2-202ENST00000333611 MAFBQ9Y5Q3 323 aaPredicted RBP11.96□□□□□ -0.49
LIMK2-202ENST00000333611 C2CD4BA6NLJ0 364 aa11.96□□□□□ -0.5
LIMK2-202ENST00000333611 PAPSS1O43252 624 aaPredicted RBP11.96□□□□□ -0.5
LIMK2-202ENST00000333611 GLRA3O75311 464 aa11.96□□□□□ -0.5
LIMK2-202ENST00000333611 SLC4A1P02730 911 aa11.96□□□□□ -0.5
LIMK2-202ENST00000333611 SERPINE1P05121 402 aa11.96□□□□□ -0.5
LIMK2-202ENST00000333611 PSMB4P28070 264 aa11.96□□□□□ -0.5
LIMK2-202ENST00000333611 SLC10A2Q12908 348 aaPredicted RBP11.96□□□□□ -0.5
LIMK2-202ENST00000333611 OTOP3Q7RTS5 596 aa11.96□□□□□ -0.5
LIMK2-202ENST00000333611 KDELC2Q7Z4H8 507 aa11.96□□□□□ -0.5
LIMK2-202ENST00000333611 LGI2Q8N0V4 545 aa11.96□□□□□ -0.5
LIMK2-202ENST00000333611 ZFP90Q8TF47 636 aa11.96□□□□□ -0.5
LIMK2-202ENST00000333611 SEPT1Q8WYJ6 367 aa11.96□□□□□ -0.5
LIMK2-202ENST00000333611 CCDC120Q96HB5 630 aa11.96□□□□□ -0.5
LIMK2-202ENST00000333611 RPL10LQ96L21 214 aaKnown RBP11.96□□□□□ -0.5
LIMK2-202ENST00000333611 SIGLEC10Q96LC7 697 aa11.96□□□□□ -0.5
LIMK2-202ENST00000333611 FRMD8P1Q9BZ68 369 aaPredicted RBP11.96□□□□□ -0.5
LIMK2-202ENST00000333611 C6orf62Q9GZU0 229 aaPredicted RBP11.96□□□□□ -0.5
LIMK2-202ENST00000333611 C1orf21Q9H246 121 aa11.96□□□□□ -0.5
LIMK2-202ENST00000333611 SYBUQ9NX95 663 aa11.96□□□□□ -0.5
LIMK2-202ENST00000333611 KLHL8Q9P2G9 620 aaPredicted RBP11.96□□□□□ -0.5
LIMK2-202ENST00000333611 HACL1Q9UJ83 578 aa11.96□□□□□ -0.5
LIMK2-202ENST00000333611 PLIN3O60664 434 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 TPPPO94811 219 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 FGF3P11487 239 aaPredicted RBP11.95□□□□□ -0.5
LIMK2-202ENST00000333611 ARL4AP40617 200 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 HADHAP40939 763 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 SERPINB9P50453 376 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 SURF1Q15526 300 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 BOLA3Q53S33 107 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 CHERPQ8IWX8 916 aaKnown RBP11.95□□□□□ -0.5
LIMK2-202ENST00000333611 ABHD11Q8NFV4 315 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 TRUB1Q8WWH5 349 aaKnown RBP11.95□□□□□ -0.5
LIMK2-202ENST00000333611 PLAC1Q9HBJ0 212 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 MAP3K20Q9NYL2 800 aaKnown RBP11.95□□□□□ -0.5
LIMK2-202ENST00000333611 TRAF6Q9Y4K3 522 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 A0A087WZ62 844 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 KLF11O14901 512 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 NRP2O60462 931 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 NDUFS2O75306 463 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 HDCP19113 662 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 MATN1P21941 496 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 ALDH3B2P48448 385 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 NUMBP49757 651 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 ZNF135P52742 658 aaPredicted RBP11.95□□□□□ -0.5
LIMK2-202ENST00000333611 TUBA4AP68366 448 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 IRF9Q00978 393 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 IFRD2Q12894 506 aaPredicted RBP11.95□□□□□ -0.5
LIMK2-202ENST00000333611 STILQ15468 1287 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 MBLAC2Q68D91 279 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 UGT3A1Q6NUS8 523 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 PAGE2Q7Z2X7 111 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 STRA8Q7Z7C7 330 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 PLD6Q8N2A8 252 aaKnown RBP11.95□□□□□ -0.5
LIMK2-202ENST00000333611 UBR7Q8N806 425 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 SDCCAG3Q96C92 435 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 SPATA33Q96N06 139 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 FDXACB1Q9BRP7 624 aaPredicted RBP11.95□□□□□ -0.5
LIMK2-202ENST00000333611 NT5C1AQ9BXI3 368 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 SLC39A10Q9ULF5 831 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 C9JVG2 144 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 TRDMT1O14717 391 aaKnown RBP11.95□□□□□ -0.5
LIMK2-202ENST00000333611 CHRNGP07510 517 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 UBL4AP11441 157 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 IL4RP24394 825 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 MPSTP25325 297 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 GNG2P59768 71 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 ABCE1P61221 599 aaKnown RBP11.95□□□□□ -0.5
LIMK2-202ENST00000333611 XRRA1Q6P2D8 792 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 TP53INP2Q8IXH6 220 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 OR52K1Q8NGK4 314 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 LPGAT1Q92604 370 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 AGAP2Q99490 1192 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 LHX5Q9H2C1 402 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 TMEM134Q9H6X4 195 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 TOR4AQ9NXH8 423 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.95□□□□□ -0.5
LIMK2-202ENST00000333611 MAT2BQ9NZL9 334 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 PCDHA11Q9Y5I1 949 aa11.95□□□□□ -0.5
LIMK2-202ENST00000333611 TTC34A8MYJ7 566 aa11.94□□□□□ -0.5
LIMK2-202ENST00000333611 RNF103O00237 685 aa11.94□□□□□ -0.5
LIMK2-202ENST00000333611 SOCS2O14508 198 aa11.94□□□□□ -0.5
LIMK2-202ENST00000333611 VDRP11473 427 aa11.94□□□□□ -0.5
LIMK2-202ENST00000333611 CYP3A5P20815 502 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms