RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 H0YAE9 185 aa24.49■■□□□ 1.51
SOX1-201ENST00000330949 EIF3FO00303 357 aaPredicted RBP24.49■■□□□ 1.51
SOX1-201ENST00000330949 RGS20O76081 388 aa24.49■■□□□ 1.51
SOX1-201ENST00000330949 NR4A1P22736 598 aa24.49■■□□□ 1.51
SOX1-201ENST00000330949 IFITM3Q01628 133 aa24.49■■□□□ 1.51
SOX1-201ENST00000330949 GHRHRQ02643 423 aa24.49■■□□□ 1.51
SOX1-201ENST00000330949 ZBTB33Q86T24 672 aa24.49■■□□□ 1.51
SOX1-201ENST00000330949 LILRB4Q8NHJ6 448 aa24.49■■□□□ 1.51
SOX1-201ENST00000330949 HDAC10Q969S8 669 aa24.49■■□□□ 1.51
SOX1-201ENST00000330949 MYRFLQ96LU7 910 aa24.49■■□□□ 1.51
SOX1-201ENST00000330949 WARS2Q9UGM6 360 aaKnown RBP24.49■■□□□ 1.51
SOX1-201ENST00000330949 PSMD11O00231 422 aa24.49■■□□□ 1.51
SOX1-201ENST00000330949 BCAS1O75363 584 aaPredicted RBP24.49■■□□□ 1.51
SOX1-201ENST00000330949 GRAP2O75791 330 aa24.49■■□□□ 1.51
SOX1-201ENST00000330949 CA8P35219 290 aa24.49■■□□□ 1.51
SOX1-201ENST00000330949 RAP1GAPP47736 663 aa24.49■■□□□ 1.51
SOX1-201ENST00000330949 EN1Q05925 392 aaPredicted RBP24.49■■□□□ 1.51
SOX1-201ENST00000330949 SPPL2CQ8IUH8 684 aa24.49■■□□□ 1.51
SOX1-201ENST00000330949 CCNYL1Q8N7R7 359 aa24.49■■□□□ 1.51
SOX1-201ENST00000330949 PDZD8Q8NEN9 1154 aa24.49■■□□□ 1.51
SOX1-201ENST00000330949 SPPL2BQ8TCT7 592 aa24.49■■□□□ 1.51
SOX1-201ENST00000330949 CAPSLQ8WWF8 208 aa24.49■■□□□ 1.51
SOX1-201ENST00000330949 NPHS1O60500 1241 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 PSAPP07602 524 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 GSTM2P28161 218 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 SERPINB1P30740 379 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 ABCG1P45844 678 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 ADARB1P78563 741 aaKnown RBP24.48■■□□□ 1.51
SOX1-201ENST00000330949 TFAMQ00059 246 aaKnown RBP24.48■■□□□ 1.51
SOX1-201ENST00000330949 ANO4Q32M45 955 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 SAMD7Q7Z3H4 446 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 AKAP14Q86UN6 197 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 LEMD2Q8NC56 503 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 MAGEE2Q8TD90 523 aaPredicted RBP24.48■■□□□ 1.51
SOX1-201ENST00000330949 VPS39Q96JC1 886 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 GMIPQ9P107 970 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 MTF2Q9Y483 593 aaPredicted RBP24.48■■□□□ 1.51
SOX1-201ENST00000330949 SIP14410 1827 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 A8MU76 341 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 HACD1B0YJ81 288 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 TNFRSF10AO00220 468 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 VWA5AO00534 786 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 MGEA5O60502 916 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 ACTR2P61160 394 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 IFITM2Q01629 132 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 BNIP2Q12982 314 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 ORC1Q13415 861 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 SURF1Q15526 300 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 KIAA0408Q6ZU52 694 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 NEK10Q6ZWH5 1172 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 DSG4Q86SJ6 1040 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 TRPV3Q8NET8 790 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 FAR2Q96K12 515 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 C1QTNF1Q9BXJ1 281 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 SNX25Q9H3E2 840 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 LRRC4Q9HBW1 653 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 JPH1Q9HDC5 661 aaPredicted RBP24.48■■□□□ 1.51
SOX1-201ENST00000330949 SCUBE2Q9NQ36 999 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 COL2A1P02458 1487 aaPredicted RBP24.48■■□□□ 1.51
SOX1-201ENST00000330949 DPYSL4O14531 572 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 NUAK1O60285 661 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 GPC4O75487 556 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 PITRM1Q5JRX3 1037 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 LCN8Q6JVE9 175 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 FAM183BPQ6ZVS7 135 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 TMEM130Q8N3G9 435 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 AFAP1L2Q8N4X5 818 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 CEP44Q9C0F1 390 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 MYOZ2Q9NPC6 264 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 SLC39A10Q9ULF5 831 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 AP4E1Q9UPM8 1137 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 VWA7Q9Y334 891 aa24.48■■□□□ 1.51
SOX1-201ENST00000330949 SNAP29O95721 258 aa24.47■■□□□ 1.51
SOX1-201ENST00000330949 CCND2P30279 289 aa24.47■■□□□ 1.51
SOX1-201ENST00000330949 HOXD11P31277 338 aaPredicted RBP24.47■■□□□ 1.51
SOX1-201ENST00000330949 SDC4P31431 198 aa24.47■■□□□ 1.51
SOX1-201ENST00000330949 GLRBP48167 497 aa24.47■■□□□ 1.51
SOX1-201ENST00000330949 HMGCS2P54868 508 aa24.47■■□□□ 1.51
SOX1-201ENST00000330949 AQP6Q13520 282 aa24.47■■□□□ 1.51
SOX1-201ENST00000330949 FRG1Q14331 258 aaKnown RBP24.47■■□□□ 1.51
SOX1-201ENST00000330949 ATAD3BQ5T9A4 648 aa24.47■■□□□ 1.51
SOX1-201ENST00000330949 UGT3A1Q6NUS8 523 aa24.47■■□□□ 1.51
SOX1-201ENST00000330949 VSIG10LQ86VR7 867 aa24.47■■□□□ 1.51
SOX1-201ENST00000330949 NIM1KQ8IY84 436 aa24.47■■□□□ 1.51
SOX1-201ENST00000330949 ZCCHC7Q8N3Z6 543 aaKnown RBP24.47■■□□□ 1.51
SOX1-201ENST00000330949 TXNDC15Q96J42 360 aa24.47■■□□□ 1.51
SOX1-201ENST00000330949 ARPC5LQ9BPX5 153 aa24.47■■□□□ 1.51
SOX1-201ENST00000330949 SLC39A3Q9BRY0 314 aa24.47■■□□□ 1.51
SOX1-201ENST00000330949 FUNDC2Q9BWH2 189 aa24.47■■□□□ 1.51
SOX1-201ENST00000330949 HOXD1Q9GZZ0 328 aa24.47■■□□□ 1.51
SOX1-201ENST00000330949 ING2Q9H160 280 aa24.47■■□□□ 1.51
SOX1-201ENST00000330949 GTSE1Q9NYZ3 720 aa24.47■■□□□ 1.51
SOX1-201ENST00000330949 DTLQ9NZJ0 730 aa24.47■■□□□ 1.51
SOX1-201ENST00000330949 CCDC78A2IDD5 438 aa24.47■■□□□ 1.51
SOX1-201ENST00000330949 FARP2O94887 1054 aaPredicted RBP24.47■■□□□ 1.51
SOX1-201ENST00000330949 EDN1P05305 212 aa24.47■■□□□ 1.51
SOX1-201ENST00000330949 GPIP06744 558 aa24.47■■□□□ 1.51
SOX1-201ENST00000330949 DPEP1P16444 411 aa24.47■■□□□ 1.51
SOX1-201ENST00000330949 CBX2Q14781 532 aaPredicted RBP24.47■■□□□ 1.51
SOX1-201ENST00000330949 PIWIL3Q7Z3Z3 882 aaKnown RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms