RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 ELMO2Q96JJ3 720 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 CDK5RAP1Q96SZ6 601 aaKnown RBP8.45□□□□□ -1.06
SKA2-201ENST00000330137 CGRRF1Q99675 332 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 MXRA8Q9BRK3 442 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 ZC3H12CQ9C0D7 883 aaKnown RBP8.45□□□□□ -1.06
SKA2-201ENST00000330137 MUC3BQ9H195 1237 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 LRRC40Q9H9A6 602 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 APOBEC3GQ9HC16 384 aaKnown RBP8.45□□□□□ -1.06
SKA2-201ENST00000330137 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.45□□□□□ -1.06
SKA2-201ENST00000330137 KCNN3Q9UGI6 736 aa8.45□□□□□ -1.06
SKA2-201ENST00000330137 HACD1B0YJ81 288 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 M0R3G1 203 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 ICMTO60725 284 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 DDHD2O94830 711 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 SEC24DO94855 1032 aaPredicted RBP8.44□□□□□ -1.06
SKA2-201ENST00000330137 PIGRP01833 764 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 FYNP06241 537 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 POLBP06746 335 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 BMP4P12644 408 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 S100A5P33763 92 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 POLR2IP36954 125 aaKnown RBP8.44□□□□□ -1.06
SKA2-201ENST00000330137 ALDH7A1P49419 539 aaKnown RBP8.44□□□□□ -1.06
SKA2-201ENST00000330137 DNAJB13P59910 316 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 CTAG1AP78358 180 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 AQP6Q13520 282 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 GALNT3Q14435 633 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 C15orf59Q2T9L4 293 aaPredicted RBP8.44□□□□□ -1.06
SKA2-201ENST00000330137 AGAP6Q5VW22 663 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 PTRH1Q86Y79 214 aaKnown RBP8.44□□□□□ -1.06
SKA2-201ENST00000330137 LYSMD2Q8IV50 215 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 WDTC1Q8N5D0 677 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 BPIFB6Q8NFQ5 453 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 ZFP90Q8TF47 636 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 TSPEARQ8WU66 669 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 ACSF2Q96CM8 615 aaPredicted RBP8.44□□□□□ -1.06
SKA2-201ENST00000330137 TSNARE1Q96NA8 513 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 AGAP4Q96P64 663 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 ZNF670Q9BS34 389 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 BDH2Q9BUT1 245 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 CALN1Q9BXU9 219 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 RUBCNLQ9H714 662 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 UBA2Q9UBT2 640 aaPredicted RBP8.44□□□□□ -1.06
SKA2-201ENST00000330137 KLQ9UEF7 1012 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 GGA1Q9UJY5 639 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 BAG5Q9UL15 447 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 NDUFAF1Q9Y375 327 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 GRIP1Q9Y3R0 1128 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 KCNU1A8MYU2 1149 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 POLRMTO00411 1230 aaKnown RBP8.44□□□□□ -1.06
SKA2-201ENST00000330137 MRASO14807 208 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 AURKAO14965 403 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 SHOXO15266 292 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 ATG7O95352 703 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 PIGNO95427 931 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 KRT19P08727 400 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 TNNI1P19237 187 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 POLR2CP19387 275 aaPredicted RBP8.44□□□□□ -1.06
SKA2-201ENST00000330137 EEF1B2P24534 225 aaKnown RBP8.44□□□□□ -1.06
SKA2-201ENST00000330137 MPSTP25325 297 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 ACVR2AP27037 513 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 RBL1P28749 1068 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 GRIA4P48058 902 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 ZNF143P52747 638 aaPredicted RBP8.44□□□□□ -1.06
SKA2-201ENST00000330137 GTF2IP78347 998 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 ZNF45Q02386 682 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 IL18R1Q13478 541 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 MTM1Q13496 603 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 DNASE1L3Q13609 305 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 CRY1Q16526 586 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 SMTNL2Q2TAL5 461 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 HSDL1Q3SXM5 330 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 CDONQ4KMG0 1287 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 ARL13AQ5H913 290 aaPredicted RBP8.44□□□□□ -1.06
SKA2-201ENST00000330137 DCAF8Q5TAQ9 597 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 BTLAQ7Z6A9 289 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 DSG4Q86SJ6 1040 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 ADGRG5Q8IZF4 528 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 OR13J1Q8NGT2 312 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 DPF3Q92784 378 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 FBXL20Q96IG2 436 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 MMP27Q9H306 513 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 MEAF6Q9HAF1 191 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 SEPT9Q9UHD8 586 aaPredicted RBP8.44□□□□□ -1.06
SKA2-201ENST00000330137 SERPINA10Q9UK55 444 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 OAZ3Q9UMX2 235 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 SCAF8Q9UPN6 1271 aaKnown RBP8.44□□□□□ -1.06
SKA2-201ENST00000330137 SNX5Q9Y5X3 404 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 PTPRFP10586 1907 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 SDHDO14521 159 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 DAB1O75553 588 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 RPL10P27635 214 aaKnown RBP8.44□□□□□ -1.06
SKA2-201ENST00000330137 SFNP31947 248 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 DDOSTP39656 456 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 RAP1GAPP47736 663 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 ALDH3A2P51648 485 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 BCAR1P56945 870 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 COPZ1P61923 177 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 TNFAIP2Q03169 654 aa8.44□□□□□ -1.06
SKA2-201ENST00000330137 EIF2B5Q13144 721 aaKnown RBP8.44□□□□□ -1.06
SKA2-201ENST00000330137 FASTKQ14296 549 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms