RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 RNF225M0QZC1 329 aaPredicted RBP6.76□□□□□ -1.33
CSTF3-201ENST00000323959 FAM189A1O60320 539 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 CLDN14O95500 239 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 CCDC172P0C7W6 258 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 CXCL8P10145 99 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 PRLRP16471 622 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 KIR3DL1P43629 444 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 HADHBP55084 474 aaKnown RBP6.76□□□□□ -1.33
CSTF3-201ENST00000323959 TMEM132DQ14C87 1099 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 TSR1Q2NL82 804 aaKnown RBP6.76□□□□□ -1.33
CSTF3-201ENST00000323959 C1orf220Q5T0J3 134 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 SLC39A4Q6P5W5 647 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 ZNF517Q6ZMY9 492 aaPredicted RBP6.76□□□□□ -1.33
CSTF3-201ENST00000323959 SPRED1Q7Z699 444 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 RNF10Q8N5U6 811 aaKnown RBP6.76□□□□□ -1.33
CSTF3-201ENST00000323959 TAF4BQ92750 862 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 FBXO32Q969P5 355 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 CCDC120Q96HB5 630 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 STK33Q9BYT3 514 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 NACA2Q9H009 215 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 EPN1Q9Y6I3 576 aaPredicted RBP6.76□□□□□ -1.33
CSTF3-201ENST00000323959 CHD3Q12873 2000 aaKnown RBP6.76□□□□□ -1.33
CSTF3-201ENST00000323959 MXRA5Q9NR99 2828 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 EDDM13A0A1B0GTR0 161 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 INAFM1C9JVW0 142 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 CES2O00748 559 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 SIN3BO75182 1162 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 TOM1L1O75674 476 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 ALPIP09923 528 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 TRIM21P19474 475 aaKnown RBP6.76□□□□□ -1.33
CSTF3-201ENST00000323959 THOP1P52888 689 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 ADKP55263 362 aaKnown RBP6.76□□□□□ -1.33
CSTF3-201ENST00000323959 MCL1Q07820 350 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 UGT8Q16880 541 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 EXOC3L4Q17RC7 722 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 MAP9Q49MG5 647 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 PPP1R2P3Q6NXS1 205 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 KLHDC10Q6PID8 442 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 Q6ZSR6 202 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 ZNF572Q7Z3I7 529 aaPredicted RBP6.76□□□□□ -1.33
CSTF3-201ENST00000323959 GPD1LQ8N335 351 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 IRX2Q9BZI1 471 aaPredicted RBP6.76□□□□□ -1.33
CSTF3-201ENST00000323959 ZNF395Q9H8N7 513 aaPredicted RBP6.76□□□□□ -1.33
CSTF3-201ENST00000323959 TMEM8AQ9HCN3 771 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 CNTN6Q9UQ52 1028 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 RPS6KL1Q9Y6S9 549 aa6.76□□□□□ -1.33
CSTF3-201ENST00000323959 TDRD6O60522 2096 aaKnown RBP6.76□□□□□ -1.33
CSTF3-201ENST00000323959 A0A0U1RQS6 177 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 C19orf84I3L1E1 186 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 CPNE6O95741 557 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 STAU1O95793 577 aaKnown RBP6.75□□□□□ -1.33
CSTF3-201ENST00000323959 FURINP09958 794 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 FERP16591 822 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 ARHGAP25P42331 645 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 PSMD8P48556 350 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 VAV2P52735 878 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 ST8SIA6P61647 398 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 Q0VFX4 171 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 LBRQ14739 615 aaKnown RBP6.75□□□□□ -1.33
CSTF3-201ENST00000323959 CHST9Q7L1S5 443 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 IRF2BP2Q7Z5L9 587 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 NT5DC4Q86YG4 428 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 PDCL2Q8N4E4 241 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 KCTD13Q8WZ19 329 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 RTP4Q96DX8 246 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 TMEM51Q9NW97 253 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 IL37Q9NZH6 218 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 CDH9Q9ULB4 789 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 KPNA7A9QM74 516 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 CASC3O15234 703 aaKnown RBP6.75□□□□□ -1.33
CSTF3-201ENST00000323959 CREG1O75629 220 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 KRT13P13646 458 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 UCHL3P15374 230 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 DLSTP36957 453 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 GUCY2FP51841 1108 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 PEX3P56589 373 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 CSNK1G2P78368 415 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 GCNT1Q02742 428 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 CYP24A1Q07973 514 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 CETN1Q12798 172 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 CEBPEQ15744 281 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 VWA5B1Q5TIE3 1220 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 PTAR1Q7Z6K3 402 aaPredicted RBP6.75□□□□□ -1.33
CSTF3-201ENST00000323959 NELFCDQ8IXH7 590 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 KIF18AQ8NI77 898 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 SLC30A5Q8TAD4 765 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 PARD3BQ8TEW8 1205 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 PTCD2Q8WV60 388 aaKnown RBP6.75□□□□□ -1.33
CSTF3-201ENST00000323959 ART4Q93070 314 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 PMEPA1Q969W9 287 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 MYLPFQ96A32 169 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 ILKAPQ9H0C8 392 aaPredicted RBP6.75□□□□□ -1.33
CSTF3-201ENST00000323959 NHEJ1Q9H9Q4 299 aaPredicted RBP6.75□□□□□ -1.33
CSTF3-201ENST00000323959 LUC7LQ9NQ29 371 aaKnown RBP6.75□□□□□ -1.33
CSTF3-201ENST00000323959 FGF21Q9NSA1 209 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 GTF3C4Q9UKN8 822 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 CA5BQ9Y2D0 317 aa6.75□□□□□ -1.33
CSTF3-201ENST00000323959 REXO2Q9Y3B8 237 aaKnown RBP6.75□□□□□ -1.33
CSTF3-201ENST00000323959 DIDO1Q9BTC0 2240 aaKnown RBP6.75□□□□□ -1.33
CSTF3-201ENST00000323959 TLCD2A6NGC4 264 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms