RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 FAM96AQ9H5X1 160 aa9.2□□□□□ -0.94
CD46-202ENST00000322918 IGFLR1Q9H665 355 aa9.2□□□□□ -0.94
CD46-202ENST00000322918 EBF2Q9HAK2 575 aa9.2□□□□□ -0.94
CD46-202ENST00000322918 TCAF1Q9Y4C2 921 aa9.2□□□□□ -0.94
CD46-202ENST00000322918 USP15Q9Y4E8 981 aaPredicted RBP9.2□□□□□ -0.94
CD46-202ENST00000322918 A0A096LPK6 155 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 TYW5A2RUC4 315 aaKnown RBP9.19□□□□□ -0.94
CD46-202ENST00000322918 H3BNC9 293 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 EFCAB14O75071 495 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 ALDH1A2O94788 518 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 BAIAP3O94812 1187 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 TSHRP16473 764 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 GABRB3P28472 473 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 SPRP35270 261 aaPredicted RBP9.19□□□□□ -0.94
CD46-202ENST00000322918 BMPR1AP36894 532 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 PBX2P40425 430 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 STK19P49842 368 aaPredicted RBP9.19□□□□□ -0.94
CD46-202ENST00000322918 CDK18Q07002 472 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 KDELC1Q6UW63 502 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 SH3RF2Q8TEC5 729 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 PLD4Q96BZ4 506 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 DNAJC1Q96KC8 554 aaKnown RBP9.19□□□□□ -0.94
CD46-202ENST00000322918 TSSK1BQ9BXA7 367 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 PPCSQ9HAB8 311 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 SCUBE2Q9NQ36 999 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 PLLPQ9Y342 182 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 UBA6A0AVT1 1052 aaPredicted RBP9.19□□□□□ -0.94
CD46-202ENST00000322918 LINC01553A4QN01 128 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 NEDD8-MDP1E9PL57 170 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 INSIG1O15503 277 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 TMCC1O94876 653 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 LINC00271P0C7V0 271 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 ARNTP27540 789 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 HTR7P34969 479 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 ADRA1AP35348 466 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 NEK3P51956 506 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 EPHB1P54762 984 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 RHOAP61586 193 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 SLC5A9Q2M3M2 681 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 POM121L1PQ3SYA9 428 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 RBM20Q5T481 1227 aaKnown RBP9.19□□□□□ -0.94
CD46-202ENST00000322918 SNX30Q5VWJ9 437 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 FAM219BQ5XKK7 198 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 CXorf57Q6NSI4 855 aaKnown RBP9.19□□□□□ -0.94
CD46-202ENST00000322918 MARK2Q7KZI7 788 aaKnown RBP9.19□□□□□ -0.94
CD46-202ENST00000322918 TTC8Q8TAM2 541 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 CCT6BQ92526 530 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 EXT2Q93063 718 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 ZNF570Q96NI8 536 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 EMILIN2Q9BXX0 1053 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 ABCG8Q9H221 673 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 MARCH4Q9P2E8 410 aaPredicted RBP9.19□□□□□ -0.94
CD46-202ENST00000322918 KLHL14Q9P2G3 628 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 LSM7Q9UK45 103 aaKnown RBP9.19□□□□□ -0.94
CD46-202ENST00000322918 TRIM33Q9UPN9 1127 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 PCDHB9Q9Y5E1 797 aa9.19□□□□□ -0.94
CD46-202ENST00000322918 WASH4PA8MWX3 477 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 RFXAPO00287 272 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 LILRB3O75022 631 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 SMNDC1O75940 238 aaKnown RBP eCLIP9.18□□□□□ -0.942e-8■□□□□ 9.9
CD46-202ENST00000322918 CTSOP43234 321 aaPredicted RBP9.18□□□□□ -0.94
CD46-202ENST00000322918 MAPKAPK2P49137 400 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 SERPINB9P50453 376 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 YBEYP58557 167 aaPredicted RBP9.18□□□□□ -0.94
CD46-202ENST00000322918 NRG1Q02297 640 aaPredicted RBP9.18□□□□□ -0.94
CD46-202ENST00000322918 BST1Q10588 318 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 PABPC1LQ4VXU2 614 aaKnown RBP9.18□□□□□ -0.94
CD46-202ENST00000322918 LACTB2Q53H82 288 aaPredicted RBP9.18□□□□□ -0.94
CD46-202ENST00000322918 CES4AQ5XG92 561 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 NEPROQ6NW34 567 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 ZNF449Q6P9G9 518 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 SH2D5Q6ZV89 423 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 TBC1D1Q86TI0 1168 aaPredicted RBP9.18□□□□□ -0.94
CD46-202ENST00000322918 CCNJLQ8IV13 435 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 MRPL43Q8N983 215 aaKnown RBP9.18□□□□□ -0.94
CD46-202ENST00000322918 RIN3Q8TB24 985 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 SPPL3Q8TCT6 385 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 KCTD4Q8WVF5 259 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 ZSWIM3Q96MP5 696 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 RBBP8Q99708 897 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 CPNE1Q99829 537 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 TASP1Q9H6P5 420 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 PIDD1Q9HB75 910 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.18□□□□□ -0.94
CD46-202ENST00000322918 FETUBQ9UGM5 382 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 ZNF180Q9UJW8 692 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 PATJQ8NI35 1801 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 TK2O00142 265 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 LEFTY2O00292 366 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 TM9SF1O15321 606 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 DIAPH2O60879 1101 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 DNAJC8O75937 253 aaPredicted RBP9.18□□□□□ -0.94
CD46-202ENST00000322918 PIGNO95427 931 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 C2P06681 752 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 ALPIP09923 528 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 CD70P32970 193 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 CCR10P46092 362 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 ARF5P84085 180 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 SLC18A2Q05940 514 aa9.18□□□□□ -0.94
CD46-202ENST00000322918 FASTKD1Q53R41 847 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms