RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 TADA1Q96BN2 335 aa22.52■■□□□ 1.2
PNKP-201ENST00000322344 PABPC5Q96DU9 382 aaKnown RBP22.52■■□□□ 1.2
PNKP-201ENST00000322344 FAM193BQ96PV7 902 aaPredicted RBP22.52■■□□□ 1.2
PNKP-201ENST00000322344 PPP1R12CQ9BZL4 782 aa22.52■■□□□ 1.2
PNKP-201ENST00000322344 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.52■■□□□ 1.2
PNKP-201ENST00000322344 MFSD1Q9H3U5 465 aa22.52■■□□□ 1.2
PNKP-201ENST00000322344 EML4Q9HC35 981 aaKnown RBP22.52■■□□□ 1.2
PNKP-201ENST00000322344 ZDHHC7Q9NXF8 308 aa22.52■■□□□ 1.2
PNKP-201ENST00000322344 BCAP29Q9UHQ4 241 aa22.52■■□□□ 1.2
PNKP-201ENST00000322344 MRPL42Q9Y6G3 142 aaKnown RBP22.52■■□□□ 1.2
PNKP-201ENST00000322344 EIF4E1BA6NMX2 242 aaKnown RBP22.52■■□□□ 1.19
PNKP-201ENST00000322344 TADA2AO75478 443 aa22.52■■□□□ 1.19
PNKP-201ENST00000322344 RTN3O95197 1032 aaPredicted RBP22.52■■□□□ 1.19
PNKP-201ENST00000322344 MMP2P08253 660 aa22.52■■□□□ 1.19
PNKP-201ENST00000322344 HAPLN1P10915 354 aaPredicted RBP22.52■■□□□ 1.19
PNKP-201ENST00000322344 YWHAQP27348 245 aa22.52■■□□□ 1.19
PNKP-201ENST00000322344 SLC26A3P40879 764 aa22.52■■□□□ 1.19
PNKP-201ENST00000322344 PRKCZQ05513 592 aa22.52■■□□□ 1.19
PNKP-201ENST00000322344 IL10RBQ08334 325 aa22.52■■□□□ 1.19
PNKP-201ENST00000322344 LAMB3Q13751 1172 aa22.52■■□□□ 1.19
PNKP-201ENST00000322344 CSHL1Q14406 222 aa22.52■■□□□ 1.19
PNKP-201ENST00000322344 PDCD2Q16342 344 aaPredicted RBP22.52■■□□□ 1.19
PNKP-201ENST00000322344 ALFQ53S48 1182 aa22.52■■□□□ 1.19
PNKP-201ENST00000322344 VARS2Q5ST30 1063 aaKnown RBP22.52■■□□□ 1.19
PNKP-201ENST00000322344 SPATA6LQ8N4H0 392 aa22.52■■□□□ 1.19
PNKP-201ENST00000322344 OR13J1Q8NGT2 312 aa22.52■■□□□ 1.19
PNKP-201ENST00000322344 PPP2R3CQ969Q6 453 aa22.52■■□□□ 1.19
PNKP-201ENST00000322344 PPP1R36Q96LQ0 422 aa22.52■■□□□ 1.19
PNKP-201ENST00000322344 CATSPER2Q96P56 530 aa22.52■■□□□ 1.19
PNKP-201ENST00000322344 ZBTB26Q9HCK0 441 aa22.52■■□□□ 1.19
PNKP-201ENST00000322344 MROH6A6NGR9 719 aa22.51■■□□□ 1.19
PNKP-201ENST00000322344 OR6C75A6NL08 312 aa22.51■■□□□ 1.19
PNKP-201ENST00000322344 DRGXA6NNA5 263 aa22.51■■□□□ 1.19
PNKP-201ENST00000322344 FAM155AB1AL88 458 aaPredicted RBP22.51■■□□□ 1.19
PNKP-201ENST00000322344 CNTN5O94779 1100 aa22.51■■□□□ 1.19
PNKP-201ENST00000322344 CKBP12277 381 aa22.51■■□□□ 1.19
PNKP-201ENST00000322344 GRK4P32298 578 aa22.51■■□□□ 1.19
PNKP-201ENST00000322344 TM4SF4P48230 202 aa22.51■■□□□ 1.19
PNKP-201ENST00000322344 USP46P62068 366 aa22.51■■□□□ 1.19
PNKP-201ENST00000322344 MTA1Q13330 715 aa22.51■■□□□ 1.19
PNKP-201ENST00000322344 ACAP2Q15057 778 aa22.51■■□□□ 1.19
PNKP-201ENST00000322344 PSMD5Q16401 504 aa22.51■■□□□ 1.19
PNKP-201ENST00000322344 PARP15Q460N3 678 aa22.51■■□□□ 1.19
PNKP-201ENST00000322344 TCHHL1Q5QJ38 904 aaPredicted RBP22.51■■□□□ 1.19
PNKP-201ENST00000322344 BNC2Q6ZN30 1099 aaPredicted RBP22.51■■□□□ 1.19
PNKP-201ENST00000322344 KBTBD6Q86V97 674 aa22.51■■□□□ 1.19
PNKP-201ENST00000322344 CILP2Q8IUL8 1156 aa22.51■■□□□ 1.19
PNKP-201ENST00000322344 DSELQ8IZU8 1212 aa22.51■■□□□ 1.19
PNKP-201ENST00000322344 CEP70Q8NHQ1 597 aa22.51■■□□□ 1.19
PNKP-201ENST00000322344 FBXO32Q969P5 355 aa22.51■■□□□ 1.19
PNKP-201ENST00000322344 KLHL5Q96PQ7 755 aa22.51■■□□□ 1.19
PNKP-201ENST00000322344 OLFM1Q99784 485 aa22.51■■□□□ 1.19
PNKP-201ENST00000322344 AURKAO14965 403 aa22.5■■□□□ 1.19
PNKP-201ENST00000322344 SORBS2O94875 1100 aaKnown RBP22.5■■□□□ 1.19
PNKP-201ENST00000322344 LINGO3P0C6S8 592 aa22.5■■□□□ 1.19
PNKP-201ENST00000322344 PRKAR2AP13861 404 aaKnown RBP22.5■■□□□ 1.19
PNKP-201ENST00000322344 PAX7P23759 505 aa22.5■■□□□ 1.19
PNKP-201ENST00000322344 MAXP61244 160 aa22.5■■□□□ 1.19
PNKP-201ENST00000322344 DSC2Q02487 901 aa22.5■■□□□ 1.19
PNKP-201ENST00000322344 CTXN3Q4LDR2 81 aa22.5■■□□□ 1.19
PNKP-201ENST00000322344 HECTD2Q5U5R9 776 aa22.5■■□□□ 1.19
PNKP-201ENST00000322344 SLC22A9Q8IVM8 553 aa22.5■■□□□ 1.19
PNKP-201ENST00000322344 PGAM4Q8N0Y7 254 aa22.5■■□□□ 1.19
PNKP-201ENST00000322344 PSMG2Q969U7 264 aa22.5■■□□□ 1.19
PNKP-201ENST00000322344 NDNQ99608 321 aa22.5■■□□□ 1.19
PNKP-201ENST00000322344 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.5■■□□□ 1.19
PNKP-201ENST00000322344 DLGAP2Q9P1A6 1054 aa22.5■■□□□ 1.19
PNKP-201ENST00000322344 PRG3Q9Y2Y8 225 aaPredicted RBP22.5■■□□□ 1.19
PNKP-201ENST00000322344 FRMPD3Q5JV73 1810 aa22.5■■□□□ 1.19
PNKP-201ENST00000322344 IPO13O94829 963 aaKnown RBP22.5■■□□□ 1.19
PNKP-201ENST00000322344 SP100P23497 879 aaPredicted RBP22.5■■□□□ 1.19
PNKP-201ENST00000322344 GALNT1Q10472 559 aaPredicted RBP22.5■■□□□ 1.19
PNKP-201ENST00000322344 RFTN1Q14699 578 aaPredicted RBP22.5■■□□□ 1.19
PNKP-201ENST00000322344 PPM1LQ5SGD2 360 aa22.5■■□□□ 1.19
PNKP-201ENST00000322344 FBXL22Q6P050 247 aa22.5■■□□□ 1.19
PNKP-201ENST00000322344 RNF180Q86T96 592 aa22.5■■□□□ 1.19
PNKP-201ENST00000322344 ZNF354CQ86Y25 554 aa22.5■■□□□ 1.19
PNKP-201ENST00000322344 SGF29Q96ES7 293 aa22.5■■□□□ 1.19
PNKP-201ENST00000322344 KLHL4Q9C0H6 718 aa22.5■■□□□ 1.19
PNKP-201ENST00000322344 EFCAB1Q9HAE3 211 aa22.5■■□□□ 1.19
PNKP-201ENST00000322344 TLR8Q9NR97 1041 aaKnown RBP22.5■■□□□ 1.19
PNKP-201ENST00000322344 COMMD8Q9NX08 183 aa22.5■■□□□ 1.19
PNKP-201ENST00000322344 GTSE1Q9NYZ3 720 aa22.5■■□□□ 1.19
PNKP-201ENST00000322344 G3BP2Q9UN86 482 aaKnown RBP22.5■■□□□ 1.19
PNKP-201ENST00000322344 VWA7Q9Y334 891 aa22.5■■□□□ 1.19
PNKP-201ENST00000322344 LOC285095A0A1B0GVY8 99 aa22.49■■□□□ 1.19
PNKP-201ENST00000322344 SDHDO14521 159 aa22.49■■□□□ 1.19
PNKP-201ENST00000322344 RAMP2O60895 175 aa22.49■■□□□ 1.19
PNKP-201ENST00000322344 YBEYP58557 167 aaPredicted RBP22.49■■□□□ 1.19
PNKP-201ENST00000322344 ZNF789Q5FWF6 425 aa22.49■■□□□ 1.19
PNKP-201ENST00000322344 RAP1GAP2Q684P5 730 aa22.49■■□□□ 1.19
PNKP-201ENST00000322344 PDSS2Q86YH6 399 aa22.49■■□□□ 1.19
PNKP-201ENST00000322344 ARRDC2Q8TBH0 407 aa22.49■■□□□ 1.19
PNKP-201ENST00000322344 LINC01599Q8WXQ3 324 aa22.49■■□□□ 1.19
PNKP-201ENST00000322344 PEX13Q92968 403 aa22.49■■□□□ 1.19
PNKP-201ENST00000322344 IGSF8Q969P0 613 aa22.49■■□□□ 1.19
PNKP-201ENST00000322344 UBXN10Q96LJ8 280 aa22.49■■□□□ 1.19
PNKP-201ENST00000322344 MARCH2Q9P0N8 246 aa22.49■■□□□ 1.19
PNKP-201ENST00000322344 A8MT66 165 aa22.48■■□□□ 1.19
PNKP-201ENST00000322344 CASQ2O14958 399 aaPredicted RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms