RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 NDUFV1P49821 464 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 CEACAM7Q14002 265 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 HNRNPDQ14103 355 aaKnown RBP12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 NR1D2Q14995 579 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 NR6A1Q15406 480 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 MAPRE1Q15691 268 aaKnown RBP12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 SGO1Q5FBB7 561 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 FAM126BQ8IXS8 530 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 MICU2Q8IYU8 434 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 GLMNQ92990 594 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 ADI1Q9BV57 179 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 DGCR6LQ9BY27 220 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 KLHL25Q9H0H3 589 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 TNRC6CQ9HCJ0 1690 aaKnown RBP12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 C22orf31O95567 290 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 PENKP01210 267 aaPredicted RBP12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 CYP2C18P33260 490 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 SCNN1AP37088 669 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 RAD23AP54725 363 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 TNK2Q07912 1038 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 SFSWAPQ12872 951 aaKnown RBP12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 GTF2H3Q13889 308 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 MYLK3Q32MK0 819 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 BROXQ5VW32 411 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 ITFG1Q8TB96 612 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 C19orf60Q96EN9 201 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 TEKT5Q96M29 485 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 RUBCNLQ9H714 662 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 LIN28AQ9H9Z2 209 aaKnown RBP12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 PTGES3LE9PB15 166 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 MT-CYBP00156 380 aaPredicted RBP12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 HOXB8P17481 243 aaPredicted RBP12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 AXLP30530 894 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 WNT3AP56704 352 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 RHDQ02161 417 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 ZRANB3Q5FWF4 1079 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 INTS6LQ5JSJ4 861 aaKnown RBP12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 TRIM74Q86UV6 250 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 TRIM73Q86UV7 250 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 ZC3HC1Q86WB0 502 aaKnown RBP12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 ABI1Q8IZP0 508 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 ZFP28Q8NHY6 868 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 HM13Q8TCT9 377 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 GPR22Q99680 433 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 TMPRSS4Q9NRS4 437 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 SUCOQ9UBS9 1254 aaKnown RBP12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 CASTOR2A6NHX0 329 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 MAN1A2O60476 641 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 BDNFP23560 247 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 SNAPC2Q13487 334 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 HOMEZQ8IX15 550 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 PPP1R13LQ8WUF5 828 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 FIG4Q92562 907 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 SEPT8Q92599 483 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 MOCOSQ96EN8 888 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 TAS2R13Q9NYV9 303 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 NUDT5Q9UKK9 219 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 VPS9D1Q9Y2B5 631 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 SLC30A1Q9Y6M5 507 aa12.82□□□□□ -0.36
DNMT3A-202ENST00000321117 SMIM28A0A1B0GU29 152 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 PPEF2O14830 753 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 IRF6O14896 467 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 LRIG2O94898 1065 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 ARIH2O95376 493 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 AKT1P31749 480 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 CA8P35219 290 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 CPOXP36551 454 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 MAGEA6P43360 314 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 TRAP1Q12931 704 aaKnown RBP12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 FOXD4Q12950 439 aaPredicted RBP12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 PLCL1Q15111 1095 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 VPS26BQ4G0F5 336 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 CENPLQ8N0S6 344 aaPredicted RBP12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 C8orf59Q8N0T1 100 aaPredicted RBP12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 ZCCHC7Q8N3Z6 543 aaKnown RBP12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 ZNF276Q8N554 614 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 PHC3Q8NDX5 983 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 MAPK15Q8TD08 544 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 CANT1Q8WVQ1 401 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 VRTNQ9H8Y1 702 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 ABI2Q9NYB9 513 aaPredicted RBP12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 FGF10O15520 208 aaPredicted RBP12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 BUD23O43709 281 aaKnown RBP12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 ALDH1A2O94788 518 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 ENDOD1O94919 500 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 SLC5A3P53794 718 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 FAM45BPQ6NSW5 357 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 PAOXQ6QHF9 649 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 ANGPTL8Q6UXH0 198 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 LRRC8DQ7L1W4 858 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 MIB1Q86YT6 1006 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 FAM45AQ8TCE6 357 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 SLC9A7Q96T83 725 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 SORT1Q99523 831 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 LIMD1Q9UGP4 676 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 POLG2Q9UHN1 485 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 C9JVG2 144 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 ATP6V1G1O75348 118 aa12.81□□□□□ -0.36
DNMT3A-202ENST00000321117 APOA1P02647 267 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms