RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 FAM240BA0A1B0GVZ2 78 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 DDX3XO00571 662 aaKnown RBP eCLIP16.97■□□□□ 0.319e-14■■■□□ 17.1
SMCHD1-201ENST00000320876 MAGEA2P43356 314 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 NDST1P52848 882 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 PSTKQ8IV42 348 aaKnown RBP16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 GMCL1Q96IK5 515 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 GIT1Q9Y2X7 761 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 PRR36Q9H6K5 1346 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 FADS2O95864 444 aaKnown RBP16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 ANXA5P08758 320 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 PTGS2P35354 604 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 GCLCP48506 637 aaPredicted RBP16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 LRRN4CLQ8ND94 238 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 BAP1Q92560 729 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 OXCT2Q9BYC2 517 aaPredicted RBP16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 OTCP00480 354 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 C9P02748 559 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 ARMC12Q5T9G4 340 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 ELOVL4Q9GZR5 314 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 POPDC2Q9HBU9 364 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 NWD1Q149M9 1564 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 RAB27AP51159 221 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 CLCN5P51795 746 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 BTBD9Q96Q07 612 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 DDX3YO15523 660 aaKnown RBP16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 LDOC1O95751 146 aaPredicted RBP16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 PPIBP23284 216 aaKnown RBP16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 BCL2L1Q07817 233 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 LCN1P1Q5VSP4 162 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 ZFP14Q9HCL3 533 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 THG1LQ9NWX6 298 aaKnown RBP16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 TBC1D24Q9ULP9 559 aa16.97■□□□□ 0.31
SMCHD1-201ENST00000320876 CXCL8P10145 99 aa16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 ATF4P18848 351 aaPredicted RBP16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 CLK3P49761 638 aaKnown RBP16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 MEA1Q16626 185 aa16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 LSM12Q3MHD2 195 aaKnown RBP16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 OVOS1Q6IE37 1185 aa16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 MINDY2Q8NBR6 621 aa16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 RHOBTB2Q9BYZ6 727 aa16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 SYNPO2Q9UMS6 1093 aa16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 NR2F1P10589 423 aa16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 MIPP30301 263 aa16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 RPL19P84098 196 aaKnown RBP16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 TBX2Q13207 712 aaPredicted RBP16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 NEPROQ6NW34 567 aa16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 SYTL5Q8TDW5 730 aaPredicted RBP16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 DDX43Q9NXZ2 648 aaKnown RBP16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 PPLO60437 1756 aa16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 AP5Z1O43299 807 aa16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 KDELR1P24390 212 aa16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 C12orf56Q8IXR9 622 aa16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 ERMAPQ96PL5 475 aaPredicted RBP16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 TARBP1Q13395 1621 aaKnown RBP16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 ZMPSTE24O75844 475 aa16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 IFNA6P05013 189 aa16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 NUDT17P0C025 328 aa16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 SERPINA4P29622 427 aa16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 GJD3Q8N144 294 aa16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 TRIM2Q9C040 744 aa16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 ZNF12P17014 697 aa16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 BTN3A2P78410 334 aa16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 C4orf19Q8IY42 314 aa16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 ANKRD13AQ8IZ07 590 aa16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 SCAF8Q9UPN6 1271 aaKnown RBP16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 MCIDASD6RGH6 385 aa16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 WEE1P30291 646 aa16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 MAPK9P45984 424 aa16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 ATP13A1Q9HD20 1204 aa16.96■□□□□ 0.31
SMCHD1-201ENST00000320876 BUD31P41223 144 aaPredicted RBP16.96■□□□□ 0.3
SMCHD1-201ENST00000320876 PYHIN1Q6K0P9 492 aa16.96■□□□□ 0.3
SMCHD1-201ENST00000320876 HOPXQ9BPY8 73 aaPredicted RBP16.96■□□□□ 0.3
SMCHD1-201ENST00000320876 PNPLA8Q9NP80 782 aa16.96■□□□□ 0.3
SMCHD1-201ENST00000320876 TRPV5Q9NQA5 729 aa16.96■□□□□ 0.3
SMCHD1-201ENST00000320876 KANSL3Q9P2N6 904 aa16.96■□□□□ 0.3
SMCHD1-201ENST00000320876 PCDHGA10Q9Y5H3 936 aa16.96■□□□□ 0.3
SMCHD1-201ENST00000320876 BTNL10A8MVZ5 291 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 BCKDKO14874 412 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 PTPN1P18031 435 aaKnown RBP16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 MTHFRP42898 656 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 ELAVL2Q12926 359 aaKnown RBP16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 SUZ12Q15022 739 aaKnown RBP16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 TOMM20Q15388 145 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 PQLC1Q8N2U9 271 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 HM13Q8TCT9 377 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 TRMUO75648 421 aaKnown RBP16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 PSMB4P28070 264 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 GRB14Q14449 540 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 CWF19L1Q69YN2 538 aaKnown RBP16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 PPP1R16AQ96I34 528 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 OR52E6Q96RD3 313 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 FUCA2Q9BTY2 467 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 NOL11Q9H8H0 719 aaKnown RBP16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 PXMP2Q9NR77 195 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 DPP7Q9UHL4 492 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 TSPAN4O14817 238 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 HDAC3O15379 428 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 RGS10O43665 173 aa16.95■□□□□ 0.3
SMCHD1-201ENST00000320876 DRD4P21917 467 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms