RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 SYCP1Q15431 976 aa13.39□□□□□ -0.27
SYCN-201ENST00000318438 PTPN20Q4JDL3 420 aa13.39□□□□□ -0.27
SYCN-201ENST00000318438 ZC3H12AQ5D1E8 599 aaKnown RBP13.39□□□□□ -0.27
SYCN-201ENST00000318438 EFHC1Q5JVL4 640 aa13.39□□□□□ -0.27
SYCN-201ENST00000318438 TMEM164Q5U3C3 297 aa13.39□□□□□ -0.27
SYCN-201ENST00000318438 KIAA1161Q6NSJ0 714 aa13.39□□□□□ -0.27
SYCN-201ENST00000318438 OLFML1Q6UWY5 402 aa13.39□□□□□ -0.27
SYCN-201ENST00000318438 FAM183BPQ6ZVS7 135 aa13.39□□□□□ -0.27
SYCN-201ENST00000318438 APTXQ7Z2E3 356 aaKnown RBP13.39□□□□□ -0.27
SYCN-201ENST00000318438 NOP9Q86U38 636 aaKnown RBP13.39□□□□□ -0.27
SYCN-201ENST00000318438 ZDHHC17Q8IUH5 632 aa13.39□□□□□ -0.27
SYCN-201ENST00000318438 SLITRK4Q8IW52 837 aa13.39□□□□□ -0.27
SYCN-201ENST00000318438 TMEM35BQ8NCS4 154 aa13.39□□□□□ -0.27
SYCN-201ENST00000318438 TMIEQ8NEW7 156 aa13.39□□□□□ -0.27
SYCN-201ENST00000318438 ALG14Q96F25 216 aa13.39□□□□□ -0.27
SYCN-201ENST00000318438 TBATAQ96M53 351 aa13.39□□□□□ -0.27
SYCN-201ENST00000318438 SLC2A13Q96QE2 648 aa13.39□□□□□ -0.27
SYCN-201ENST00000318438 ERGIC2Q96RQ1 377 aa13.39□□□□□ -0.27
SYCN-201ENST00000318438 HDAC8Q9BY41 377 aa13.39□□□□□ -0.27
SYCN-201ENST00000318438 PDCL3Q9H2J4 239 aa13.39□□□□□ -0.27
SYCN-201ENST00000318438 SEMA6CQ9H3T2 930 aa13.39□□□□□ -0.27
SYCN-201ENST00000318438 SYNCQ9H7C4 482 aa13.39□□□□□ -0.27
SYCN-201ENST00000318438 GPR34Q9UPC5 381 aa13.39□□□□□ -0.27
SYCN-201ENST00000318438 FARP1Q9Y4F1 1045 aaPredicted RBP13.39□□□□□ -0.27
SYCN-201ENST00000318438 DOCK4Q8N1I0 1966 aa13.39□□□□□ -0.27
SYCN-201ENST00000318438 F8P00451 2351 aa13.39□□□□□ -0.27
SYCN-201ENST00000318438 MED13Q9UHV7 2174 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 PDZD2O15018 2839 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 IGLON5A6NGN9 336 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 K7ERQ8 282 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 EPHB6O15197 1021 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 CNTN5O94779 1100 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 TRUB2O95900 331 aaKnown RBP13.38□□□□□ -0.27
SYCN-201ENST00000318438 SRCP12931 536 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 ATP1A3P13637 1013 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 PTMSP20962 102 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 UGT1A3P35503 534 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 SOX5P35711 763 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 THOP1P52888 689 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 UBXN1Q04323 297 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 SGCGQ13326 291 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 TAF5Q15542 800 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 DEFB109BQ30KR1 87 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 ARSIQ5FYB1 569 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 ARTNQ5T4W7 220 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 SLC26A9Q7LBE3 791 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 HEATR4Q86WZ0 1026 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 ZNF677Q86XU0 584 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 TEX19Q8NA77 164 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 GALNT11Q8NCW6 608 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 ZNF397Q8NF99 534 aaPredicted RBP13.38□□□□□ -0.27
SYCN-201ENST00000318438 APOBEC4Q8WW27 367 aaKnown RBP13.38□□□□□ -0.27
SYCN-201ENST00000318438 FEM1CQ96JP0 617 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 BTN2A3PQ96KV6 586 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 LENG8Q96PV6 779 aaPredicted RBP13.38□□□□□ -0.27
SYCN-201ENST00000318438 EPAS1Q99814 870 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 FEM1AQ9BSK4 669 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 CUEDC1Q9NWM3 386 aaPredicted RBP13.38□□□□□ -0.27
SYCN-201ENST00000318438 VPS28Q9UK41 221 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 FADS3Q9Y5Q0 445 aa13.38□□□□□ -0.27
SYCN-201ENST00000318438 PRRC2CQ9Y520 2896 aaKnown RBP13.38□□□□□ -0.27
SYCN-201ENST00000318438 SMTNL1A8MU46 457 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 F5H5T6 163 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 DAB1O75553 588 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 GFPT2O94808 682 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 APOEP02649 317 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 PRNPP04156 253 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 ADRB3P13945 408 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 GRNP28799 593 aaKnown RBP13.37□□□□□ -0.27
SYCN-201ENST00000318438 SCNN1AP37088 669 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 GABRB2P47870 512 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 ZNF165P49910 485 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 NEK3P51956 506 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 CDK17Q00537 523 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 SLC6A3Q01959 620 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 CENPCQ03188 943 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 CDC20Q12834 499 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 PTK2BQ14289 1009 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 TAF3Q5VWG9 929 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 C1QL3Q5VWW1 255 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 CACNA2D3Q8IZS8 1091 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 DEFB106AQ8N104 65 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 ATP11CQ8NB49 1132 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 MSANTD4Q8NCY6 345 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 NEK11Q8NG66 645 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 GPBAR1Q8TDU6 330 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 SCG3Q8WXD2 468 aaKnown RBP13.37□□□□□ -0.27
SYCN-201ENST00000318438 PCMTD1Q96MG8 357 aaPredicted RBP13.37□□□□□ -0.27
SYCN-201ENST00000318438 C1QTNF2Q9BXJ5 285 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 B3GNT4Q9C0J1 378 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 TNKS2Q9H2K2 1166 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 NLRC4Q9NPP4 1024 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.37□□□□□ -0.27
SYCN-201ENST00000318438 GGT7Q9UJ14 662 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 NOCTQ9UK39 431 aaKnown RBP13.37□□□□□ -0.27
SYCN-201ENST00000318438 CHD5Q8TDI0 1954 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 TRPM6Q9BX84 2022 aa13.37□□□□□ -0.27
SYCN-201ENST00000318438 TCAF2A6NFQ2 919 aa13.36□□□□□ -0.27
SYCN-201ENST00000318438 EFCAB7A8K855 629 aa13.36□□□□□ -0.27
SYCN-201ENST00000318438 KCNU1A8MYU2 1149 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms