RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 RGRP47804 291 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 TAS2R39P59534 338 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 ARHGAP8P85298 464 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 NRG1Q02297 640 aaPredicted RBP12.53□□□□□ -0.4
RNF4-201ENST00000314289 DLG1Q12959 904 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 ZNF235Q14590 738 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 CWF19L1Q69YN2 538 aaKnown RBP12.53□□□□□ -0.4
RNF4-201ENST00000314289 NEPROQ6NW34 567 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 POTEHQ6S545 545 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 LINGO4Q6UY18 593 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 RPS27LQ71UM5 84 aaKnown RBP12.53□□□□□ -0.4
RNF4-201ENST00000314289 HDAC10Q969S8 669 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 VWCEQ96DN2 955 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 NSMCE3Q96MG7 304 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 GPR22Q99680 433 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 MCMBPQ9BTE3 642 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 UBE2OQ9C0C9 1292 aaKnown RBP12.53□□□□□ -0.4
RNF4-201ENST00000314289 KCNK4Q9NYG8 393 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 FBXO5Q9UKT4 447 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 G3BP2Q9UN86 482 aaKnown RBP12.53□□□□□ -0.4
RNF4-201ENST00000314289 CRYL1Q9Y2S2 319 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 DOCK6Q96HP0 2047 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 NEMP2A6NFY4 417 aa12.52□□□□□ -0.4
RNF4-201ENST00000314289 HOXA2O43364 376 aa12.52□□□□□ -0.4
RNF4-201ENST00000314289 CCDC22O60826 627 aa12.52□□□□□ -0.4
RNF4-201ENST00000314289 LMNAP02545 664 aaKnown RBP12.52□□□□□ -0.4
RNF4-201ENST00000314289 ZDHHC11BP0C7U3 371 aa12.52□□□□□ -0.4
RNF4-201ENST00000314289 ACRP10323 421 aa12.52□□□□□ -0.4
RNF4-201ENST00000314289 CORO1AP31146 461 aaKnown RBP12.52□□□□□ -0.4
RNF4-201ENST00000314289 MAGEA12P43365 314 aa12.52□□□□□ -0.4
RNF4-201ENST00000314289 HARS2P49590 506 aaKnown RBP12.52□□□□□ -0.4
RNF4-201ENST00000314289 SLC8B1Q6J4K2 584 aa12.52□□□□□ -0.4
RNF4-201ENST00000314289 CENPLQ8N0S6 344 aaPredicted RBP12.52□□□□□ -0.4
RNF4-201ENST00000314289 POU5F2Q8N7G0 328 aa12.52□□□□□ -0.4
RNF4-201ENST00000314289 OR13J1Q8NGT2 312 aa12.52□□□□□ -0.4
RNF4-201ENST00000314289 WDR60Q8WVS4 1066 aa12.52□□□□□ -0.4
RNF4-201ENST00000314289 PRICKLE1Q96MT3 831 aaPredicted RBP12.52□□□□□ -0.4
RNF4-201ENST00000314289 ACE2Q9BYF1 805 aaPredicted RBP12.52□□□□□ -0.4
RNF4-201ENST00000314289 TREX1Q9NSU2 369 aa12.52□□□□□ -0.4
RNF4-201ENST00000314289 MARCH4Q9P2E8 410 aaPredicted RBP12.52□□□□□ -0.4
RNF4-201ENST00000314289 MTRRQ9UBK8 725 aa12.52□□□□□ -0.4
RNF4-201ENST00000314289 XIRP2A4UGR9 3374 aa12.52□□□□□ -0.41
RNF4-201ENST00000314289 GOLGA8QA0A0J9YX86 632 aa12.52□□□□□ -0.41
RNF4-201ENST00000314289 GOLGA8OA6NCC3 632 aa12.52□□□□□ -0.41
RNF4-201ENST00000314289 DRGXA6NNA5 263 aa12.52□□□□□ -0.41
RNF4-201ENST00000314289 MEI4A8MW99 385 aa12.52□□□□□ -0.41
RNF4-201ENST00000314289 GOLGA8NF8WBI6 632 aa12.52□□□□□ -0.41
RNF4-201ENST00000314289 CBX4O00257 560 aa12.52□□□□□ -0.41
RNF4-201ENST00000314289 ACSL4O60488 711 aa12.52□□□□□ -0.41
RNF4-201ENST00000314289 HSPA4LO95757 839 aa12.52□□□□□ -0.41
RNF4-201ENST00000314289 SBK3P0C264 359 aa12.52□□□□□ -0.41
RNF4-201ENST00000314289 HMGA1P17096 107 aaKnown RBP12.52□□□□□ -0.41
RNF4-201ENST00000314289 SCNN1BP51168 640 aa12.52□□□□□ -0.41
RNF4-201ENST00000314289 ABCE1P61221 599 aaKnown RBP12.52□□□□□ -0.41
RNF4-201ENST00000314289 IKBKEQ14164 716 aa12.52□□□□□ -0.41
RNF4-201ENST00000314289 LRRC74BQ6ZQY2 392 aa12.52□□□□□ -0.41
RNF4-201ENST00000314289 CLEC14AQ86T13 490 aa12.52□□□□□ -0.41
RNF4-201ENST00000314289 WDR75Q8IWA0 830 aaKnown RBP12.52□□□□□ -0.41
RNF4-201ENST00000314289 FSTL5Q8N475 847 aaPredicted RBP12.52□□□□□ -0.41
RNF4-201ENST00000314289 PTCD3Q96EY7 689 aaKnown RBP12.52□□□□□ -0.41
RNF4-201ENST00000314289 NSL1Q96IY1 281 aa12.52□□□□□ -0.41
RNF4-201ENST00000314289 BTBD10Q9BSF8 475 aa12.52□□□□□ -0.41
RNF4-201ENST00000314289 TRIM4Q9C037 500 aa12.52□□□□□ -0.41
RNF4-201ENST00000314289 TMEM39AQ9NV64 488 aa12.52□□□□□ -0.41
RNF4-201ENST00000314289 LRCH1Q9Y2L9 728 aa12.52□□□□□ -0.41
RNF4-201ENST00000314289 TRAFD1O14545 582 aaPredicted RBP12.51□□□□□ -0.41
RNF4-201ENST00000314289 PRRG1O14668 218 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 TBX10O75333 385 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 UBTFL6P0CB48 400 aaPredicted RBP12.51□□□□□ -0.41
RNF4-201ENST00000314289 NAGLUP54802 743 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 CSE1LP55060 971 aaKnown RBP12.51□□□□□ -0.41
RNF4-201ENST00000314289 PEX6Q13608 980 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 CSHL1Q14406 222 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 ARHGEF6Q15052 776 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 HECTD3Q5T447 861 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 IRGCQ6NXR0 463 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 OR13C4Q8NGS5 318 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 PPP4R1Q8TF05 950 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 TBATAQ96M53 351 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 TMEM175Q9BSA9 504 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 WWP1Q9H0M0 922 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 XPR1Q9UBH6 696 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 NEMP1O14524 444 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 GSC2O15499 205 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 ZNF189O75820 626 aaPredicted RBP12.51□□□□□ -0.41
RNF4-201ENST00000314289 MPOP05164 745 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 BMP1P13497 986 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 CD1EP15812 388 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 STMN1P16949 149 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 MNX1P50219 401 aaPredicted RBP12.51□□□□□ -0.41
RNF4-201ENST00000314289 PLK1P53350 603 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 ROR2Q01974 943 aaKnown RBP12.51□□□□□ -0.41
RNF4-201ENST00000314289 PDCD6IPQ8WUM4 868 aaKnown RBP12.51□□□□□ -0.41
RNF4-201ENST00000314289 IFT43Q96FT9 208 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 TMEM169Q96HH4 297 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 OLFM1Q99784 485 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 DDX50Q9BQ39 737 aaKnown RBP12.51□□□□□ -0.41
RNF4-201ENST00000314289 GATA5Q9BWX5 397 aaPredicted RBP12.51□□□□□ -0.41
RNF4-201ENST00000314289 C1QTNF1Q9BXJ1 281 aa12.51□□□□□ -0.41
RNF4-201ENST00000314289 CYP4F12Q9HCS2 524 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms