RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 OR2W6PQ8NHA6 318 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 PRCCQ92733 491 aaPredicted RBP8.88□□□□□ -0.99
COL6A5-202ENST00000312481 PABPC5Q96DU9 382 aaKnown RBP8.88□□□□□ -0.99
COL6A5-202ENST00000312481 TSEN34Q9BSV6 310 aaKnown RBP8.88□□□□□ -0.99
COL6A5-202ENST00000312481 NIFKQ9BYG3 293 aaKnown RBP8.88□□□□□ -0.99
COL6A5-202ENST00000312481 MUC3BQ9H195 1237 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 SETD4Q9NVD3 440 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 NUDT5Q9UKK9 219 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 AP5Z1O43299 807 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 STAU1O95793 577 aaKnown RBP8.88□□□□□ -0.99
COL6A5-202ENST00000312481 DMPKQ09013 629 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 LAPTM5Q13571 262 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 KCNT2Q6UVM3 1135 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 RBFAQ8N0V3 343 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 MCRS1Q96EZ8 462 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 AURKBQ96GD4 344 aaPredicted RBP8.88□□□□□ -0.99
COL6A5-202ENST00000312481 FIS1Q9Y3D6 152 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 NEMP1O14524 444 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 ALDH1A2O94788 518 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 ARHGEF15O94989 841 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 PABPC4LP0CB38 370 aaKnown RBP8.88□□□□□ -0.99
COL6A5-202ENST00000312481 PRPS2P11908 318 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 PSME3P61289 254 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 ZBTB41Q5SVQ8 909 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 TMC5Q6UXY8 1006 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 HAS1Q92839 578 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 NTAN1Q96AB6 310 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 MAGED1Q9Y5V3 778 aaPredicted RBP8.88□□□□□ -0.99
COL6A5-202ENST00000312481 MYO7AQ13402 2215 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 URADA6NGE7 173 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 H0YAE9 185 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 KPNA3O00505 521 aaPredicted RBP8.88□□□□□ -0.99
COL6A5-202ENST00000312481 MFN2O95140 757 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 FTH1P02794 183 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 PROCP04070 461 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 BGNP21810 368 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 DSG3P32926 999 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 GLRA4Q5JXX5 417 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 RIOX2Q8IUF8 465 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 REPS2Q8NFH8 660 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 TRIB3Q96RU7 358 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 ATG7O95352 703 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 AP2A1O95782 977 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 AGR2O95994 175 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 GPR15P49685 360 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 PPATQ06203 517 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 LIN54Q6MZP7 749 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 KCTD15Q96SI1 283 aaPredicted RBP8.88□□□□□ -0.99
COL6A5-202ENST00000312481 FAIM2Q9BWQ8 316 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 POPDC3Q9HBV1 291 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 SH3BP1Q9Y3L3 701 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 CNPP09543 421 aaKnown RBP8.88□□□□□ -0.99
COL6A5-202ENST00000312481 SHMT1P34896 483 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 CLK2P49760 499 aaKnown RBP8.88□□□□□ -0.99
COL6A5-202ENST00000312481 TRAM1Q15629 374 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 ZYG11AQ6WRX3 759 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 ZNF276Q8N554 614 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 TEKT5Q96M29 485 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 TDRD3Q9H7E2 651 aaKnown RBP8.88□□□□□ -0.99
COL6A5-202ENST00000312481 BTBD19C9JJ37 291 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 INPP4BO15327 924 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 LTFP02788 710 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 AKAP5P24588 427 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 RPA3P35244 121 aaPredicted RBP8.87□□□□□ -0.99
COL6A5-202ENST00000312481 TCF7P36402 384 aaPredicted RBP8.87□□□□□ -0.99
COL6A5-202ENST00000312481 MAPKAPK3Q16644 382 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 AKAP14Q86UN6 197 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 SCAIQ8N9R8 606 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 MARK4Q96L34 752 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 ZNF599Q96NL3 588 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 EPB41L1Q9H4G0 881 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 PCDHGB6Q9Y5F9 930 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 SNCAIPQ9Y6H5 919 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 OTOFQ9HC10 1997 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 METTL21EPA6NDL7 271 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 AVILO75366 819 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 OTOAQ7RTW8 1153 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 TSEN2Q8NCE0 465 aaKnown RBP8.87□□□□□ -0.99
COL6A5-202ENST00000312481 SRFBP1Q8NEF9 429 aaKnown RBP8.87□□□□□ -0.99
COL6A5-202ENST00000312481 AKT1S1Q96B36 256 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 HAPLN3Q96S86 360 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 UBE2QL1A1L167 161 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 UBXN8O00124 270 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 HAT1O14929 419 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 NRP2O60462 931 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 ALOX15P16050 662 aaPredicted RBP8.87□□□□□ -0.99
COL6A5-202ENST00000312481 EPB42P16452 691 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 EIF2B2P49770 351 aaKnown RBP8.87□□□□□ -0.99
COL6A5-202ENST00000312481 NELL1Q92832 810 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 PPP1R36Q96LQ0 422 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 EVA1AQ9H8M9 152 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 FAM205CA6NFA0 338 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 DCXO43602 365 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 PRMT3O60678 531 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 EPOP01588 193 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 NR2F6P10588 404 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 SDC2P34741 201 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 GLUD2P49448 558 aa8.87□□□□□ -0.99
COL6A5-202ENST00000312481 ATN1P54259 1190 aaPredicted RBP8.87□□□□□ -0.99
COL6A5-202ENST00000312481 NOMO3P69849 1222 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms