RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 SH2D3AQ9BRG2 576 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 KLK14Q9P0G3 267 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 SCARF1Q14162 830 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 FAM117BQ6P1L5 589 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 C4orf19Q8IY42 314 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 TMEM192Q8IY95 271 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 TRMOQ9BU70 441 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 SLC35C2Q9NQQ7 365 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 TOR4AQ9NXH8 423 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 XPR1Q9UBH6 696 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 GSTT2BP0CG30 244 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 FGFR3P22607 806 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 PPP1R15BQ5SWA1 713 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 TXNRD3Q86VQ6 643 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 BEND7Q8N7W2 519 aaPredicted RBP15.57■□□□□ 0.08
HCFC1-201ENST00000310441 OMDQ99983 421 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 UNC5CO95185 931 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 VAPBO95292 243 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 METTL18O95568 372 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 ALDH5A1P51649 535 aaPredicted RBP15.57■□□□□ 0.08
HCFC1-201ENST00000310441 FAM189A2Q15884 450 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 RTL4Q6ZR62 310 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 TTC7BQ86TV6 843 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 FRMPD4Q14CM0 1322 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 DCKP27707 260 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 ZC3H7AQ8IWR0 971 aaKnown RBP15.57■□□□□ 0.08
HCFC1-201ENST00000310441 EFHD2Q96C19 240 aaPredicted RBP15.57■□□□□ 0.08
HCFC1-201ENST00000310441 SEMA6AQ9H2E6 1030 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 MOV10Q9HCE1 1003 aaKnown RBP15.57■□□□□ 0.08
HCFC1-201ENST00000310441 CORO1CQ9ULV4 474 aaPredicted RBP15.57■□□□□ 0.08
HCFC1-201ENST00000310441 MRPS7Q9Y2R9 242 aaKnown RBP15.57■□□□□ 0.08
HCFC1-201ENST00000310441 SPATA31A3Q5VYP0 1347 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 HOXC12P31275 282 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 TCEAL6Q6IPX3 200 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 GCNT7Q6ZNI0 430 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 CCDC54Q8NEL0 328 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 APOL2Q9BQE5 337 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 C3orf14Q9HBI5 128 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 TRPV5Q9NQA5 729 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 GRIP1Q9Y3R0 1128 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 AKAP8O43823 692 aaKnown RBP15.57■□□□□ 0.08
HCFC1-201ENST00000310441 PECAM1P16284 738 aaPredicted RBP15.57■□□□□ 0.08
HCFC1-201ENST00000310441 IL18Q14116 193 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 TBC1D25Q3MII6 688 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 TTI2Q6NXR4 508 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 GPRIN3Q6ZVF9 776 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 FAR1Q8WVX9 515 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 PNMA5Q96PV4 448 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 HOPXQ9BPY8 73 aaPredicted RBP15.57■□□□□ 0.08
HCFC1-201ENST00000310441 SYT15Q9BQS2 421 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 CIDEBQ9UHD4 219 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 CYB5AP00167 134 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 ASMTP46597 345 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 ATP6V0D1P61421 351 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 SCN1BQ07699 218 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 ABRQ12979 859 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 ANGEL2Q5VTE6 544 aaKnown RBP15.56■□□□□ 0.08
HCFC1-201ENST00000310441 PTCHD4Q6ZW05 846 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 SPAG16Q8N0X2 631 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 MED28Q9H204 178 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 CAPN6Q9Y6Q1 641 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 ERVK-24P63145 666 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 GIT2Q14161 759 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 NOL9Q5SY16 702 aaKnown RBP15.56■□□□□ 0.08
HCFC1-201ENST00000310441 STXBP5Q5T5C0 1151 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 PGBD2Q6P3X8 592 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 OR2L5Q8NG80 312 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 GULP1Q9UBP9 304 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 C2CD2Q9Y426 696 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 C10orf107Q8IVU9 208 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 C15orf40Q8WUR7 153 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 TNFAIP8L1Q8WVP5 186 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 SOHLH2Q9NX45 425 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 DDX43Q9NXZ2 648 aaKnown RBP15.56■□□□□ 0.08
HCFC1-201ENST00000310441 ATXN10Q9UBB4 475 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 SLC12A4Q9UP95 1085 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 GIMD1P0DJR0 217 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 SLC6A3Q01959 620 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 PIK3R6Q5UE93 754 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 AKAP1Q92667 903 aaKnown RBP eCLIP15.56■□□□□ 0.085e-7■■■■□ 22.5
HCFC1-201ENST00000310441 ZNF221Q9UK13 617 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 IQCMA0A1B0GVH7 501 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 RAB15P59190 212 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 PITPNAQ00169 270 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 CDC42EP5Q6NZY7 148 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 WDR59Q6PJI9 974 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 ZPBP2Q6X784 338 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 RAB43Q86YS6 212 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 ZNF510Q9Y2H8 683 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 PLCZ1Q86YW0 608 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 TCF12Q99081 682 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 PNPLA8Q9NP80 782 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 N6AMT1Q9Y5N5 214 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 WFS1O76024 890 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 MICAL2O94851 1124 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 FMO4P31512 558 aa15.56■□□□□ 0.08
HCFC1-201ENST00000310441 BUD31P41223 144 aaPredicted RBP15.56■□□□□ 0.08
HCFC1-201ENST00000310441 ATXN7L2Q5T6C5 722 aaPredicted RBP15.56■□□□□ 0.08
HCFC1-201ENST00000310441 PSTKQ8IV42 348 aaKnown RBP15.56■□□□□ 0.08
HCFC1-201ENST00000310441 SNCAIPQ9Y6H5 919 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms