RNA–Protein interactions for RNA: ENST00000310232.10

CCDC13-201, Transcript of coiled-coil domain containing 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC13, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-201ENST00000310232 NOS2P35228 1153 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 HSPA13P48723 471 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 AARS2Q5JTZ9 985 aaKnown RBP13.55□□□□□ -0.24
CCDC13-201ENST00000310232 TBCELQ5QJ74 424 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 RWDD4Q6NW29 188 aaKnown RBP13.55□□□□□ -0.24
CCDC13-201ENST00000310232 DHFR2Q86XF0 187 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 RIOX2Q8IUF8 465 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 RYBPQ8N488 228 aaPredicted RBP13.55□□□□□ -0.24
CCDC13-201ENST00000310232 SMYD1Q8NB12 490 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 NUDT8Q8WV74 236 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 MED10Q9BTT4 135 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 FICDQ9BVA6 458 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 WDR6Q9NNW5 1121 aaKnown RBP13.55□□□□□ -0.24
CCDC13-201ENST00000310232 NDFIP2Q9NV92 336 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 SUCOQ9UBS9 1254 aaKnown RBP13.55□□□□□ -0.24
CCDC13-201ENST00000310232 RNF103-CHMP3A0A140T963 221 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 A0A1B0GTL3 188 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.55□□□□□ -0.24
CCDC13-201ENST00000310232 ZNF487B1APH4 448 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 GIPC1O14908 333 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 SETSIPP0DME0 302 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 CSRP3P50461 194 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 CSE1LP55060 971 aaKnown RBP13.55□□□□□ -0.24
CCDC13-201ENST00000310232 FOXA1P55317 472 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 FBXO47Q5MNV8 452 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 LYSMD3Q7Z3D4 306 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 SETD3Q86TU7 594 aaPredicted RBP13.55□□□□□ -0.24
CCDC13-201ENST00000310232 GPR180Q86V85 440 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 BBS5Q8N3I7 341 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 TFAP2CQ92754 450 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 OTUD5Q96G74 571 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 MAELQ96JY0 434 aaKnown RBP13.55□□□□□ -0.24
CCDC13-201ENST00000310232 OSBPL6Q9BZF3 934 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 LRRC4Q9HBW1 653 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 SLC38A7Q9NVC3 462 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 NCKIPSDQ9NZQ3 722 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 CD300AQ9UGN4 299 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 NUDT5Q9UKK9 219 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 SSC5DA1L4H1 1573 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 A0A0G2JMZ2 1700 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 LRRC37A2A6NM11 1700 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 TCRBV3S1A0A5B6 114 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 OR51F1A6NGY5 319 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 A8MT66 165 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 KCNH1O95259 989 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 SIX3O95343 332 aaPredicted RBP13.54□□□□□ -0.24
CCDC13-201ENST00000310232 YBX3P16989 372 aaKnown RBP eCLIP13.54□□□□□ -0.24
CCDC13-201ENST00000310232 ZNF182P17025 639 aaPredicted RBP13.54□□□□□ -0.24
CCDC13-201ENST00000310232 POLR2IP36954 125 aaKnown RBP13.54□□□□□ -0.24
CCDC13-201ENST00000310232 RXRGP48443 463 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 CREB5Q02930 508 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 ZIK1Q3SY52 487 aaPredicted RBP13.54□□□□□ -0.24
CCDC13-201ENST00000310232 PATL1Q86TB9 770 aaKnown RBP13.54□□□□□ -0.24
CCDC13-201ENST00000310232 ZDHHC17Q8IUH5 632 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 SNX29P2Q8IUI4 249 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 TANKQ92844 425 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 WNT8BQ93098 351 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 EMID1Q96A84 441 aaPredicted RBP13.54□□□□□ -0.24
CCDC13-201ENST00000310232 MRPL46Q9H2W6 279 aaKnown RBP13.54□□□□□ -0.24
CCDC13-201ENST00000310232 PFDN4Q9NQP4 134 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 CIDEBQ9UHD4 219 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 BCAP29Q9UHQ4 241 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 CORINQ9Y5Q5 1042 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 PLXNA1Q9UIW2 1896 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 H3BMQ9 156 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 NRP2O60462 931 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 LRIG2O94898 1065 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 SNRPB2P08579 225 aaKnown RBP13.54□□□□□ -0.24
CCDC13-201ENST00000310232 SLC7A1P30825 629 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 ECT2LQ008S8 904 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 RFTN1Q14699 578 aaPredicted RBP13.54□□□□□ -0.24
CCDC13-201ENST00000310232 KIF19Q2TAC6 998 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 FUT11Q495W5 492 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 BTBD8Q5XKL5 378 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 CLEC20AQ6ZU45 233 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 SIX6OS1Q8N1H7 587 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 B3GALNT2Q8NCR0 500 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 TTC16Q8NEE8 873 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 COG8Q96MW5 612 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 ANKRD60Q9BZ19 345 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 POLR1BQ9H9Y6 1135 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 VTI1BQ9UEU0 232 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 CROTQ9UKG9 612 aa13.54□□□□□ -0.24
CCDC13-201ENST00000310232 MAGED1Q9Y5V3 778 aaPredicted RBP13.54□□□□□ -0.24
CCDC13-201ENST00000310232 EI24O14681 340 aa13.53□□□□□ -0.24
CCDC13-201ENST00000310232 KPNA6O60684 536 aa13.53□□□□□ -0.24
CCDC13-201ENST00000310232 CNMDO75829 334 aa13.53□□□□□ -0.24
CCDC13-201ENST00000310232 SRP72O76094 671 aaKnown RBP13.53□□□□□ -0.24
CCDC13-201ENST00000310232 SUPT7LO94864 414 aa13.53□□□□□ -0.24
CCDC13-201ENST00000310232 GNA12Q03113 381 aa13.53□□□□□ -0.24
CCDC13-201ENST00000310232 CDH17Q12864 832 aa13.53□□□□□ -0.24
CCDC13-201ENST00000310232 GRB7Q14451 532 aa13.53□□□□□ -0.24
CCDC13-201ENST00000310232 FAM83EQ2M2I3 478 aa13.53□□□□□ -0.24
CCDC13-201ENST00000310232 PYCR3Q53H96 274 aa13.53□□□□□ -0.24
CCDC13-201ENST00000310232 TMEM126BQ8IUX1 230 aa13.53□□□□□ -0.24
CCDC13-201ENST00000310232 CMTR2Q8IYT2 770 aaKnown RBP13.53□□□□□ -0.24
CCDC13-201ENST00000310232 SHCBP1Q8NEM2 672 aa13.53□□□□□ -0.24
CCDC13-201ENST00000310232 SNX27Q96L92 541 aa13.53□□□□□ -0.24
CCDC13-201ENST00000310232 ADI1Q9BV57 179 aa13.53□□□□□ -0.24
CCDC13-201ENST00000310232 ALG9Q9H6U8 611 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms