RNA–Protein interactions for RNA: ENST00000309415.7

SH3RF3-201, Transcript of SH3 domain containing ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3RF3, Length 5,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3-201ENST00000309415 PADI3Q9ULW8 664 aa20.87■□□□□ 0.93
SH3RF3-201ENST00000309415 NDRG2Q9UN36 371 aaKnown RBP20.87■□□□□ 0.93
SH3RF3-201ENST00000309415 KCNE2Q9Y6J6 123 aa20.87■□□□□ 0.93
SH3RF3-201ENST00000309415 PTPRJQ12913 1337 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 SPATA31D1Q6ZQQ2 1576 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 PAGE1O75459 146 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 RNASEH2AO75792 299 aaKnown RBP20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 ERVK-21P61565 698 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 ZNF248Q8NDW4 579 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 OR4L1Q8NH43 312 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 NELL1Q92832 810 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 DUSP11O75319 330 aaKnown RBP20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 SPRYD7Q5W111 196 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 VSTM1Q6UX27 236 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 SYT17Q9BSW7 474 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 KIDINS220Q9ULH0 1771 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 CLUHO75153 1309 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 ZNF541Q9H0D2 1346 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 TFEBP19484 476 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 CYB5D1Q6P9G0 228 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 PHF13Q86YI8 300 aaPredicted RBP20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 MSL3Q8N5Y2 521 aaKnown RBP20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 KIAA1210Q9ULL0 1709 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 FER1L4A9Z1Z3 1794 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 DCXO43602 365 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 EPHX1P07099 455 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 ERCC2P18074 760 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 ME2P23368 584 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 LRPAP1P30533 357 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 FAM71AQ8IYT1 594 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 UXS1Q8NBZ7 420 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 MAT2BQ9NZL9 334 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 IQGAP1P46940 1657 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 LIASO43766 372 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 ATP5F1P24539 256 aaPredicted RBP20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 CORO1AP31146 461 aaKnown RBP20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 TRIQKQ629K1 86 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 TXNDC11Q6PKC3 985 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 IZUMO2Q6UXV1 221 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 RACGAP1Q9H0H5 632 aa20.86■□□□□ 0.93
SH3RF3-201ENST00000309415 OTCP00480 354 aa20.85■□□□□ 0.93
SH3RF3-201ENST00000309415 ITGB5P18084 799 aa20.85■□□□□ 0.93
SH3RF3-201ENST00000309415 BTN2A3PQ96KV6 586 aa20.85■□□□□ 0.93
SH3RF3-201ENST00000309415 CNPPD1Q9BV87 410 aa20.85■□□□□ 0.93
SH3RF3-201ENST00000309415 PLK2Q9NYY3 685 aa20.85■□□□□ 0.93
SH3RF3-201ENST00000309415 PEX11AO75192 247 aa20.85■□□□□ 0.93
SH3RF3-201ENST00000309415 ELP6Q0PNE2 266 aa20.85■□□□□ 0.93
SH3RF3-201ENST00000309415 ZNF276Q8N554 614 aa20.85■□□□□ 0.93
SH3RF3-201ENST00000309415 ARNTL2Q8WYA1 636 aa20.85■□□□□ 0.93
SH3RF3-201ENST00000309415 ZNF75CPQ92670 426 aaPredicted RBP20.85■□□□□ 0.93
SH3RF3-201ENST00000309415 ACP6Q9NPH0 428 aa20.85■□□□□ 0.93
SH3RF3-201ENST00000309415 GMIPQ9P107 970 aa20.85■□□□□ 0.93
SH3RF3-201ENST00000309415 MKL2Q9ULH7 1088 aa20.85■□□□□ 0.93
SH3RF3-201ENST00000309415 RECQL5O94762 991 aaPredicted RBP20.85■□□□□ 0.93
SH3RF3-201ENST00000309415 EIF3MQ7L2H7 374 aaKnown RBP20.85■□□□□ 0.93
SH3RF3-201ENST00000309415 POU5F2Q8N7G0 328 aa20.85■□□□□ 0.93
SH3RF3-201ENST00000309415 MRTO4Q9UKD2 239 aaKnown RBP20.85■□□□□ 0.93
SH3RF3-201ENST00000309415 APTXQ7Z2E3 356 aaKnown RBP20.85■□□□□ 0.93
SH3RF3-201ENST00000309415 ZDHHC13Q8IUH4 622 aa20.85■□□□□ 0.93
SH3RF3-201ENST00000309415 ZFP14Q9HCL3 533 aa20.85■□□□□ 0.93
SH3RF3-201ENST00000309415 TRIM43BA6NCK2 446 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 H3BNH8 94 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 RAB10P61026 200 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 OR14C36Q8NHC7 312 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 DUS2Q9NX74 493 aaKnown RBP20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 TEAD4Q15561 434 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 GPRIN3Q6ZVF9 776 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 RNF148Q8N7C7 305 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 CDRT15Q96T59 188 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 L2HGDHQ9H9P8 463 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 COG5Q9UP83 839 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 KIF20BQ96Q89 1820 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 SCN2BO60939 215 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 VIPP01282 170 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 OR4Q2P0C623 313 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 ITGA1P56199 1179 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 TATDN1Q6P1N9 297 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 ARMC8Q8IUR7 673 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 ALLCQ8N6M5 410 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 TCF25Q9BQ70 676 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 BTBD10Q9BSF8 475 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 E7ENQ6 273 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 TREHO43280 583 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 UBOX5O94941 541 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 PRMT2P55345 433 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 RPL38P63173 70 aaKnown RBP20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 RSBN1Q5VWQ0 802 aaPredicted RBP20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 NPAS4Q8IUM7 802 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 SLC9A9Q8IVB4 645 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 ADHFE1Q8IWW8 467 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 FBXO30Q8TB52 745 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 CD101Q93033 1021 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 LINGO1Q96FE5 620 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 NDUFA13Q9P0J0 144 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 RPS6KA6Q9UK32 745 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 CLOCKO15516 846 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 USP2O75604 605 aaPredicted RBP20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 PDZK1Q5T2W1 519 aa20.84■□□□□ 0.93
SH3RF3-201ENST00000309415 NEK5Q6P3R8 708 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms