RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 UBE2Q1Q7Z7E8 422 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 POC5Q8NA72 575 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 TRPM4Q8TD43 1214 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 ADAMTS18Q8TE60 1221 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 ZNF606Q8WXB4 792 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 C1orf109Q9NX04 203 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 WDR37Q9Y2I8 494 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 A0A1W2PQ72 361 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 FCHO1O14526 889 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 NCF1P14598 390 aaPredicted RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 HEPACAMQ14CZ8 416 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 USP39Q53GS9 565 aaKnown RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 GJC2Q5T442 439 aaPredicted RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 ZNF605Q86T29 641 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 KIAA2013Q8IYS2 634 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 CLYBLQ8N0X4 340 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 CLP1Q92989 425 aaKnown RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 ITCHQ96J02 903 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 CLPTM1LQ96KA5 538 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 PLIN2Q99541 437 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 KCTD14Q9BQ13 255 aaPredicted RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 IGSF9Q9P2J2 1179 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 DYRK1BQ9Y463 629 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 FAM234BA2RU67 622 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 L1CAMP32004 1257 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 RPS6P62753 249 aaKnown RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 DGKKQ5KSL6 1271 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 FGD2Q7Z6J4 655 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 ARID3BQ8IVW6 561 aaPredicted RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 ADGRF2Q8IZF7 708 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 DHRSXQ8N5I4 330 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 SHC3Q92529 594 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 INVSQ9Y283 1065 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 CAPN14A8MX76 684 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 DDX39AO00148 427 aaKnown RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 EIF1AYO14602 144 aaKnown RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 ZBTB11O95625 1053 aaPredicted RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 ATP6V1G2O95670 118 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 LATS1O95835 1130 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 URODP06132 367 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 EIF1AXP47813 144 aaKnown RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 RFX5P48382 616 aaPredicted RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 CACNB3P54284 484 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 SWSAP1Q6NVH7 229 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 TBC1D16Q8TBP0 767 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 C17orf62Q9BQA9 187 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 COLEC10Q9Y6Z7 277 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 M0QX08 132 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 AKR1A1P14550 325 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 SDC2P34741 201 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 DPP6P42658 865 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 TMBIM6P55061 237 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 KCNJ8Q15842 424 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 TSTD2Q5T7W7 516 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 C12orf65Q9H3J6 166 aaKnown RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 MEPEQ9NQ76 525 aaPredicted RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 FAM237BA0A1B0GVD1 139 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 ANGPTL8Q6UXH0 198 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 FAM47EQ6ZV65 393 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 ADAM32Q8TC27 787 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 SPATA17Q96L03 361 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 FTOQ9C0B1 505 aaKnown RBP eCLIP4.04□□□□□ -1.76
USH2A-201ENST00000307340 SLC40A1Q9NP59 571 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 SH3GLB1Q9Y371 365 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 CCDC182A6NF36 153 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 PDE5AO76074 875 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 CYP51A1Q16850 503 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 PLA2G4EQ3MJ16 856 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 SPIN4Q56A73 249 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 ADGRD1Q6QNK2 874 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 BBS12Q6ZW61 710 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 MARK2Q7KZI7 788 aaKnown RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 GATAD2BQ8WXI9 593 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 ART4Q93070 314 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 MTMR9Q96QG7 549 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 KLHL31Q9H511 634 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 SENP2Q9HC62 589 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 CD274Q9NZQ7 290 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 ZDHHC9Q9Y397 364 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 PEX16Q9Y5Y5 336 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 H0YAE9 185 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 CYP26A1O43174 497 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 KERAO60938 352 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 SKAP2O75563 359 aaPredicted RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 ALOX15P16050 662 aaPredicted RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 ATF6P18850 670 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 MMP8P22894 467 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 F8A1P23610 371 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 SUSD4Q5VX71 490 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 ZZZ3Q8IYH5 903 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 FBXO39Q8N4B4 442 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 NTAN1Q96AB6 310 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 YIPF2Q9BWQ6 316 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 PXMP2Q9NR77 195 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 DNMT3LQ9UJW3 386 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 HBS1LQ9Y450 684 aaKnown RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 CNTNAP1P78357 1384 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 TCRBV5S4A2TA0A5A2 114 aa4.04□□□□□ -1.76
USH2A-201ENST00000307340 LTA4HP09960 611 aaKnown RBP4.04□□□□□ -1.76
USH2A-201ENST00000307340 AOC1P19801 751 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms