RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 ZBTB24O43167 697 aaPredicted RBP13.13□□□□□ -0.31
TRIM35-201ENST00000305364 MSCO60682 206 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 MAFO75444 373 aaPredicted RBP13.13□□□□□ -0.31
TRIM35-201ENST00000305364 NCAM1P13591 858 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 NCK1P16333 377 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 PSMB9P28065 219 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 CAPGP40121 348 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 BMXP51813 675 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 TPTEP56180 551 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 INAQ16352 499 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 TAZQ16635 292 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 LY6KQ17RY6 165 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 MAP1SQ66K74 1059 aaPredicted RBP13.13□□□□□ -0.31
TRIM35-201ENST00000305364 NCBP2-AS2Q69YL0 99 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 ERMP1Q7Z2K6 904 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 NT5DC4Q86YG4 428 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 ZDHHC17Q8IUH5 632 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 DENND6AQ8IWF6 608 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 SLC16A10Q8TF71 515 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 ALG9Q9H6U8 611 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 OLAHQ9NV23 265 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 RNF181Q9P0P0 153 aa13.13□□□□□ -0.31
TRIM35-201ENST00000305364 PHLPP1O60346 1717 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 UBA6A0AVT1 1052 aaPredicted RBP13.12□□□□□ -0.31
TRIM35-201ENST00000305364 H3BMQ9 156 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 ERCC2P18074 760 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 EMP3P54852 163 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 DPYSL2Q16555 572 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 PRAMEF18Q5VWM3 479 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 RTP4Q96DX8 246 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 COG8Q96MW5 612 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 ABCB10Q9NRK6 738 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 MTHFD1P11586 935 aaKnown RBP13.12□□□□□ -0.31
TRIM35-201ENST00000305364 UBA1P22314 1058 aaKnown RBP13.12□□□□□ -0.31
TRIM35-201ENST00000305364 ATPAF2Q8N5M1 289 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 SLC15A4Q8N697 577 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 PSMA8Q8TAA3 256 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 HEPHQ9BQS7 1158 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 ASB7Q9H672 318 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 GBA2Q9HCG7 927 aaPredicted RBP13.12□□□□□ -0.31
TRIM35-201ENST00000305364 SPATA7Q9P0W8 599 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 TCAF2A6NFQ2 919 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 NADKO95544 446 aaPredicted RBP13.12□□□□□ -0.31
TRIM35-201ENST00000305364 JUNP05412 331 aaKnown RBP13.12□□□□□ -0.31
TRIM35-201ENST00000305364 IL4RP24394 825 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 YWHAQP27348 245 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 PPP1R3AQ16821 1122 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 SPDYE2Q495Y8 402 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 CCNYL2Q5T2Q4 361 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 ZNF534Q76KX8 674 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 SLC2A14Q8TDB8 520 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 GLT1D1Q96MS3 346 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 ANKRD60Q9BZ19 345 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 TMED5Q9Y3A6 229 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 PSMD3O43242 534 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 GRID2O43424 1007 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 AP2A1O95782 977 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 CYP2C9P11712 490 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 MAGP20916 626 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 BNIP2Q12982 314 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 PPP4R4Q6NUP7 873 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 TMEM214Q6NUQ4 689 aaKnown RBP13.12□□□□□ -0.31
TRIM35-201ENST00000305364 TMC5Q6UXY8 1006 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 ZDHHC13Q8IUH4 622 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 ZNF280CQ8ND82 737 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 ZNF420Q8TAQ5 688 aaPredicted RBP13.12□□□□□ -0.31
TRIM35-201ENST00000305364 C17orf50Q8WW18 174 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 TNIP3Q96KP6 325 aa13.12□□□□□ -0.31
TRIM35-201ENST00000305364 C9IYK1 514 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 ASNA1O43681 348 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 ALDH1A2O94788 518 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 APOA1P02647 267 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 CD1EP15812 388 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 VARSP26640 1264 aaKnown RBP13.11□□□□□ -0.31
TRIM35-201ENST00000305364 FKBP1AP62942 108 aaKnown RBP13.11□□□□□ -0.31
TRIM35-201ENST00000305364 IL5RAQ01344 420 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 RFTN1Q14699 578 aaPredicted RBP13.11□□□□□ -0.31
TRIM35-201ENST00000305364 CYS1Q717R9 158 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 SLC22A9Q8IVM8 553 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 HTRA1Q92743 480 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 MRPL45Q9BRJ2 306 aaKnown RBP13.11□□□□□ -0.31
TRIM35-201ENST00000305364 NAA50Q9GZZ1 169 aaKnown RBP13.11□□□□□ -0.31
TRIM35-201ENST00000305364 RPF2Q9H7B2 306 aaKnown RBP13.11□□□□□ -0.31
TRIM35-201ENST00000305364 SUPT3HB4E1H0 165 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 H0YJX3 145 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 NRP1O14786 923 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 GAS2O43903 313 aaKnown RBP13.11□□□□□ -0.31
TRIM35-201ENST00000305364 SNX2O60749 519 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 VTNP04004 478 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 ALDH3B2P48448 385 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 STEAP4Q687X5 459 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 RNF19BQ6ZMZ0 732 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 CARM1Q86X55 608 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 MICALL2Q8IY33 904 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 CPNE9Q8IYJ1 553 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 RAB2BQ8WUD1 216 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 RORBQ92753 470 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 TOP1MTQ969P6 601 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 LPIN3Q9BQK8 851 aa13.11□□□□□ -0.31
TRIM35-201ENST00000305364 TSR3Q9UJK0 312 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms