RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 TTC27Q6P3X3 843 aa24.68■■□□□ 1.54
HOXC9-201ENST00000303450 SLC36A4Q6YBV0 504 aa24.68■■□□□ 1.54
HOXC9-201ENST00000303450 C11orf74Q86VG3 221 aa24.68■■□□□ 1.54
HOXC9-201ENST00000303450 FAM131CQ96AQ9 280 aa24.68■■□□□ 1.54
HOXC9-201ENST00000303450 TDRD1Q9BXT4 1180 aaKnown RBP24.68■■□□□ 1.54
HOXC9-201ENST00000303450 VPS45Q9NRW7 570 aa24.68■■□□□ 1.54
HOXC9-201ENST00000303450 FAM153AQ9UHL3 310 aa24.68■■□□□ 1.54
HOXC9-201ENST00000303450 MBD1Q9UIS9 605 aaPredicted RBP24.68■■□□□ 1.54
HOXC9-201ENST00000303450 HCN4Q9Y3Q4 1203 aa24.68■■□□□ 1.54
HOXC9-201ENST00000303450 PMPCBO75439 489 aa24.67■■□□□ 1.54
HOXC9-201ENST00000303450 PGLSO95336 258 aa24.67■■□□□ 1.54
HOXC9-201ENST00000303450 TIMP2P16035 220 aa24.67■■□□□ 1.54
HOXC9-201ENST00000303450 PSMB4P28070 264 aa24.67■■□□□ 1.54
HOXC9-201ENST00000303450 FNTAP49354 379 aa24.67■■□□□ 1.54
HOXC9-201ENST00000303450 PTPN5P54829 565 aa24.67■■□□□ 1.54
HOXC9-201ENST00000303450 ADPRHP54922 357 aa24.67■■□□□ 1.54
HOXC9-201ENST00000303450 SLC14A2Q15849 920 aa24.67■■□□□ 1.54
HOXC9-201ENST00000303450 UGP2Q16851 508 aa24.67■■□□□ 1.54
HOXC9-201ENST00000303450 CEP68Q76N32 757 aa24.67■■□□□ 1.54
HOXC9-201ENST00000303450 ZSWIM9Q86XI8 627 aa24.67■■□□□ 1.54
HOXC9-201ENST00000303450 RAB7BQ96AH8 199 aa24.67■■□□□ 1.54
HOXC9-201ENST00000303450 PPP1R2P1Q96PQ5 205 aa24.67■■□□□ 1.54
HOXC9-201ENST00000303450 FEZ2Q9UHY8 353 aaPredicted RBP24.67■■□□□ 1.54
HOXC9-201ENST00000303450 CHKBQ9Y259 395 aa24.67■■□□□ 1.54
HOXC9-201ENST00000303450 FAM47DPA6NHR8 397 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 PLRG1O43660 514 aaKnown RBP24.66■■□□□ 1.54
HOXC9-201ENST00000303450 LILRB5O75023 590 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 ANXA9O76027 345 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 SEMA4FO95754 770 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 CPP00450 1065 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 SUOXP51687 545 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 RPL6Q02878 288 aaKnown RBP24.66■■□□□ 1.54
HOXC9-201ENST00000303450 PCSK7Q16549 785 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 PARP6Q2NL67 630 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 LRRC73Q5JTD7 316 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 TADA1Q96BN2 335 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 OXNAD1Q96HP4 312 aaPredicted RBP24.66■■□□□ 1.54
HOXC9-201ENST00000303450 GPR174Q9BXC1 333 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 DDX47Q9H0S4 455 aaKnown RBP24.66■■□□□ 1.54
HOXC9-201ENST00000303450 PCDH9Q9HC56 1237 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 CDC23Q9UJX2 597 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 R4GN57 208 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 LRRC72A6NJI9 287 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 UPK3BL1B0FP48 263 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 UPK3BL2E5RIL1 263 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 PDHA1P08559 390 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 ETS1P14921 441 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 BCKDHBP21953 392 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 ABL2P42684 1182 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 MPP3Q13368 585 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 KDELC2Q7Z4H8 507 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 PRUNE1Q86TP1 453 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 GRK7Q8WTQ7 553 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 SPOCK2Q92563 424 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 IFT43Q96FT9 208 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 KDM4CQ9H3R0 1056 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 PAK5Q9P286 719 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 PHTF1Q9UMS5 762 aa24.66■■□□□ 1.54
HOXC9-201ENST00000303450 AAR2Q9Y312 384 aaKnown RBP24.66■■□□□ 1.54
HOXC9-201ENST00000303450 ARIH1Q9Y4X5 557 aaPredicted RBP24.66■■□□□ 1.54
HOXC9-201ENST00000303450 ABCA7Q8IZY2 2146 aa24.65■■□□□ 1.54
HOXC9-201ENST00000303450 TBC1D3DA0A087WVF3 549 aa24.65■■□□□ 1.54
HOXC9-201ENST00000303450 TBC1D3IA0A087WXS9 549 aa24.65■■□□□ 1.54
HOXC9-201ENST00000303450 TBC1D3EA0A087X179 549 aa24.65■■□□□ 1.54
HOXC9-201ENST00000303450 TBC1D3KA0A087X1G2 549 aa24.65■■□□□ 1.54
HOXC9-201ENST00000303450 TBC1D3FA6NER0 549 aaPredicted RBP24.65■■□□□ 1.54
HOXC9-201ENST00000303450 TBC1D3LB9A6J9 549 aa24.65■■□□□ 1.54
HOXC9-201ENST00000303450 CCDC188H7C350 402 aa24.65■■□□□ 1.54
HOXC9-201ENST00000303450 NEMP1O14524 444 aa24.65■■□□□ 1.54
HOXC9-201ENST00000303450 FZD6O60353 706 aa24.65■■□□□ 1.54
HOXC9-201ENST00000303450 TBC1D3HP0C7X1 549 aa24.65■■□□□ 1.54
HOXC9-201ENST00000303450 TNNT3P45378 269 aaPredicted RBP24.65■■□□□ 1.54
HOXC9-201ENST00000303450 EPHB1P54762 984 aa24.65■■□□□ 1.54
HOXC9-201ENST00000303450 GEMP55040 296 aa24.65■■□□□ 1.54
HOXC9-201ENST00000303450 TAS2R38P59533 333 aa24.65■■□□□ 1.54
HOXC9-201ENST00000303450 TBC1D3GQ6DHY5 549 aa24.65■■□□□ 1.54
HOXC9-201ENST00000303450 TBC1D3CQ6IPX1 549 aa24.65■■□□□ 1.54
HOXC9-201ENST00000303450 ERAP2Q6P179 960 aa24.65■■□□□ 1.54
HOXC9-201ENST00000303450 TBC1D3Q8IZP1 549 aaPredicted RBP24.65■■□□□ 1.54
HOXC9-201ENST00000303450 NDUFAF2Q8N183 169 aa24.65■■□□□ 1.54
HOXC9-201ENST00000303450 TAB3Q8N5C8 712 aaPredicted RBP24.65■■□□□ 1.54
HOXC9-201ENST00000303450 GLIS1Q8NBF1 620 aa24.65■■□□□ 1.54
HOXC9-201ENST00000303450 OR2T34Q8NGX1 318 aa24.65■■□□□ 1.54
HOXC9-201ENST00000303450 ATOH1Q92858 354 aaPredicted RBP24.65■■□□□ 1.54
HOXC9-201ENST00000303450 ADGRE3Q9BY15 652 aa24.65■■□□□ 1.54
HOXC9-201ENST00000303450 FANCMQ8IYD8 2048 aa24.65■■□□□ 1.54
HOXC9-201ENST00000303450 GOLGA6CA6NDK9 693 aa24.64■■□□□ 1.53
HOXC9-201ENST00000303450 GOLGA6BA6NDN3 693 aa24.64■■□□□ 1.53
HOXC9-201ENST00000303450 PRR23AA6NEV1 266 aa24.64■■□□□ 1.53
HOXC9-201ENST00000303450 METTL18O95568 372 aa24.64■■□□□ 1.53
HOXC9-201ENST00000303450 ZSCAN5DPP0CG00 497 aa24.64■■□□□ 1.53
HOXC9-201ENST00000303450 GOLGA6DP0CG33 693 aa24.64■■□□□ 1.53
HOXC9-201ENST00000303450 NFKBIAP25963 317 aa24.64■■□□□ 1.53
HOXC9-201ENST00000303450 WNT3AP56704 352 aa24.64■■□□□ 1.53
HOXC9-201ENST00000303450 CDK18Q07002 472 aa24.64■■□□□ 1.53
HOXC9-201ENST00000303450 ELP6Q0PNE2 266 aa24.64■■□□□ 1.53
HOXC9-201ENST00000303450 SIM2Q14190 667 aaPredicted RBP24.64■■□□□ 1.53
HOXC9-201ENST00000303450 KLHL7Q8IXQ5 586 aa24.64■■□□□ 1.53
HOXC9-201ENST00000303450 IPMKQ8NFU5 416 aa24.64■■□□□ 1.53
HOXC9-201ENST00000303450 GORASP1Q9BQQ3 440 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms