RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 MAP4P27816 1152 aaKnown RBP6.54□□□□□ -1.36
ITGB1-201ENST00000302278 CSNK1DP48730 415 aa6.54□□□□□ -1.36
ITGB1-201ENST00000302278 LIMK2P53671 638 aa6.54□□□□□ -1.36
ITGB1-201ENST00000302278 ELP6Q0PNE2 266 aa6.54□□□□□ -1.36
ITGB1-201ENST00000302278 CDC20Q12834 499 aa6.54□□□□□ -1.36
ITGB1-201ENST00000302278 GRM3Q14832 879 aa6.54□□□□□ -1.36
ITGB1-201ENST00000302278 C16orf72Q14CZ0 275 aa6.54□□□□□ -1.36
ITGB1-201ENST00000302278 TSR1Q2NL82 804 aaKnown RBP6.54□□□□□ -1.36
ITGB1-201ENST00000302278 MYLK3Q32MK0 819 aa6.54□□□□□ -1.36
ITGB1-201ENST00000302278 DCAF17Q5H9S7 520 aaPredicted RBP6.54□□□□□ -1.36
ITGB1-201ENST00000302278 CRTC1Q6UUV9 634 aa6.54□□□□□ -1.36
ITGB1-201ENST00000302278 GDPD4Q6W3E5 623 aa6.54□□□□□ -1.36
ITGB1-201ENST00000302278 GRIN3AQ8TCU5 1115 aa6.54□□□□□ -1.36
ITGB1-201ENST00000302278 DHTKD1Q96HY7 919 aaPredicted RBP6.54□□□□□ -1.36
ITGB1-201ENST00000302278 MAGEH1Q9H213 219 aa6.54□□□□□ -1.36
ITGB1-201ENST00000302278 NUP210LQ5VU65 1888 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 BLACEA4D250 179 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 BECN2A8MW95 431 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 WASH4PA8MWX3 477 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 KDELR3O43731 214 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 CPNE6O95741 557 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 DDAH2O95865 285 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 ERBB2P04626 1255 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 FGF3P11487 239 aaPredicted RBP6.53□□□□□ -1.36
ITGB1-201ENST00000302278 GM2AP17900 193 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 GSCP56915 257 aaPredicted RBP6.53□□□□□ -1.36
ITGB1-201ENST00000302278 SNRPD1P62314 119 aaKnown RBP6.53□□□□□ -1.36
ITGB1-201ENST00000302278 ABHD18Q0P651 414 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 SKIDA1Q1XH10 827 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 WSCD2Q2TBF2 565 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 SPECC1LQ69YQ0 1117 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 SHC3Q92529 594 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 WDR92Q96MX6 357 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 TKTL2Q9H0I9 626 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 TRIT1Q9H3H1 467 aaKnown RBP6.53□□□□□ -1.36
ITGB1-201ENST00000302278 GOLPH3LQ9H4A5 285 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 PILRAQ9UKJ1 303 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 KCTD3Q9Y597 815 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 GTPBP10A4D1E9 387 aaKnown RBP6.53□□□□□ -1.36
ITGB1-201ENST00000302278 B4GAT1O43505 415 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 TNFP01375 233 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 CD1CP29017 333 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 MMP12P39900 470 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 C4orf17Q53FE4 359 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 LACTB2Q53H82 288 aaPredicted RBP6.53□□□□□ -1.36
ITGB1-201ENST00000302278 TMEM164Q5U3C3 297 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 TTI2Q6NXR4 508 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 NRROSQ86YC3 692 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 JAMLQ86YT9 394 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 CBARPQ8N350 705 aaPredicted RBP6.53□□□□□ -1.36
ITGB1-201ENST00000302278 PPM1KQ8N3J5 372 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 ECHDC3Q96DC8 303 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 TUBGCP5Q96RT8 1024 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 WDCPQ9H6R7 721 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 TMEM59LQ9UK28 342 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 ITM2BQ9Y287 266 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 KNL1Q8NG31 2342 aa6.53□□□□□ -1.36
ITGB1-201ENST00000302278 GNA14O95837 355 aa6.52□□□□□ -1.36
ITGB1-201ENST00000302278 CALCAP01258 141 aa6.52□□□□□ -1.36
ITGB1-201ENST00000302278 RHOQP17081 205 aa6.52□□□□□ -1.36
ITGB1-201ENST00000302278 GNA15P30679 374 aa6.52□□□□□ -1.36
ITGB1-201ENST00000302278 OR1E1P30953 314 aa6.52□□□□□ -1.36
ITGB1-201ENST00000302278 MC1RQ01726 317 aa6.52□□□□□ -1.36
ITGB1-201ENST00000302278 DNM1Q05193 864 aaKnown RBP6.52□□□□□ -1.36
ITGB1-201ENST00000302278 CETN1Q12798 172 aa6.52□□□□□ -1.36
ITGB1-201ENST00000302278 C1orf61Q13536 156 aa6.52□□□□□ -1.36
ITGB1-201ENST00000302278 LRRC14Q15048 493 aa6.52□□□□□ -1.36
ITGB1-201ENST00000302278 PAPD7Q5XG87 772 aaKnown RBP6.52□□□□□ -1.36
ITGB1-201ENST00000302278 TCTN3Q6NUS6 607 aa6.52□□□□□ -1.36
ITGB1-201ENST00000302278 LRRC31Q6UY01 552 aa6.52□□□□□ -1.36
ITGB1-201ENST00000302278 LINGO4Q6UY18 593 aa6.52□□□□□ -1.36
ITGB1-201ENST00000302278 OR7D4Q8NG98 312 aa6.52□□□□□ -1.36
ITGB1-201ENST00000302278 INTS2Q9H0H0 1204 aaKnown RBP6.52□□□□□ -1.36
ITGB1-201ENST00000302278 FBXO8Q9NRD0 319 aa6.52□□□□□ -1.36
ITGB1-201ENST00000302278 KLQ9UEF7 1012 aa6.52□□□□□ -1.36
ITGB1-201ENST00000302278 PLEKHB1Q9UF11 243 aaPredicted RBP6.52□□□□□ -1.36
ITGB1-201ENST00000302278 STAP1Q9ULZ2 295 aa6.52□□□□□ -1.36
ITGB1-201ENST00000302278 MAPK8IP1Q9UQF2 711 aa6.52□□□□□ -1.36
ITGB1-201ENST00000302278 PCDHGA6Q9Y5G7 932 aa6.52□□□□□ -1.36
ITGB1-201ENST00000302278 ZW10O43264 779 aa6.52□□□□□ -1.37
ITGB1-201ENST00000302278 HTR1BP28222 390 aa6.52□□□□□ -1.37
ITGB1-201ENST00000302278 UGT1A3P35503 534 aa6.52□□□□□ -1.37
ITGB1-201ENST00000302278 MC2RQ01718 297 aa6.52□□□□□ -1.37
ITGB1-201ENST00000302278 IGFBP7Q16270 282 aa6.52□□□□□ -1.37
ITGB1-201ENST00000302278 PTPN20Q4JDL3 420 aa6.52□□□□□ -1.37
ITGB1-201ENST00000302278 AFMIDQ63HM1 303 aa6.52□□□□□ -1.37
ITGB1-201ENST00000302278 DPY19L2P1Q6NXN4 242 aa6.52□□□□□ -1.37
ITGB1-201ENST00000302278 IRF2BP1Q8IU81 584 aa6.52□□□□□ -1.37
ITGB1-201ENST00000302278 CXorf40AQ8TE69 158 aa6.52□□□□□ -1.37
ITGB1-201ENST00000302278 ZNF641Q96N77 438 aaPredicted RBP6.52□□□□□ -1.37
ITGB1-201ENST00000302278 ASPSCR1Q9BZE9 553 aa6.52□□□□□ -1.37
ITGB1-201ENST00000302278 TTYH3Q9C0H2 523 aa6.52□□□□□ -1.37
ITGB1-201ENST00000302278 PDFQ9HBH1 243 aa6.52□□□□□ -1.37
ITGB1-201ENST00000302278 ATP13A1Q9HD20 1204 aa6.52□□□□□ -1.37
ITGB1-201ENST00000302278 FOXD4L1Q9NU39 408 aa6.52□□□□□ -1.37
ITGB1-201ENST00000302278 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.52□□□□□ -1.377e-9■□□□□ 9.6
ITGB1-201ENST00000302278 FCF1Q9Y324 198 aaKnown RBP6.52□□□□□ -1.37
ITGB1-201ENST00000302278 RELNP78509 3460 aa6.52□□□□□ -1.37
ITGB1-201ENST00000302278 ANKRD34CP0C6C1 535 aa6.52□□□□□ -1.37
ITGB1-201ENST00000302278 CYP4F2P78329 520 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms