RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 UGP2Q16851 508 aa22.45■■□□□ 1.18
SMAD1-201ENST00000302085 SLC5A9Q2M3M2 681 aa22.45■■□□□ 1.18
SMAD1-201ENST00000302085 INO80DQ53TQ3 878 aaPredicted RBP22.45■■□□□ 1.18
SMAD1-201ENST00000302085 C9orf50Q5SZB4 431 aa22.45■■□□□ 1.18
SMAD1-201ENST00000302085 RNF187Q5TA31 235 aaPredicted RBP22.45■■□□□ 1.18
SMAD1-201ENST00000302085 FYB2Q5VWT5 728 aa22.45■■□□□ 1.18
SMAD1-201ENST00000302085 RIN3Q8TB24 985 aa22.45■■□□□ 1.18
SMAD1-201ENST00000302085 BLOC1S5Q8TDH9 187 aa22.45■■□□□ 1.18
SMAD1-201ENST00000302085 ZNF358Q9NW07 568 aa22.45■■□□□ 1.18
SMAD1-201ENST00000302085 TMEM216Q9P0N5 145 aa22.45■■□□□ 1.18
SMAD1-201ENST00000302085 SIRPGQ9P1W8 387 aa22.45■■□□□ 1.18
SMAD1-201ENST00000302085 A0A096LPK6 155 aa22.45■■□□□ 1.18
SMAD1-201ENST00000302085 CCL22O00626 93 aa22.45■■□□□ 1.18
SMAD1-201ENST00000302085 KLF11O14901 512 aa22.45■■□□□ 1.18
SMAD1-201ENST00000302085 BIRC5O15392 142 aa22.45■■□□□ 1.18
SMAD1-201ENST00000302085 MT-CO1P00395 513 aa22.45■■□□□ 1.18
SMAD1-201ENST00000302085 C2P06681 752 aa22.45■■□□□ 1.18
SMAD1-201ENST00000302085 PIRTP0C851 137 aa22.45■■□□□ 1.18
SMAD1-201ENST00000302085 CES4AQ5XG92 561 aa22.45■■□□□ 1.18
SMAD1-201ENST00000302085 ZNF470Q6ECI4 717 aa22.45■■□□□ 1.18
SMAD1-201ENST00000302085 NUDCD3Q8IVD9 361 aa22.45■■□□□ 1.18
SMAD1-201ENST00000302085 MFSD6LQ8IWD5 586 aa22.45■■□□□ 1.18
SMAD1-201ENST00000302085 PLD6Q8N2A8 252 aaKnown RBP22.45■■□□□ 1.18
SMAD1-201ENST00000302085 DCAF4L2Q8NA75 395 aa22.45■■□□□ 1.18
SMAD1-201ENST00000302085 BRSK1Q8TDC3 778 aa22.45■■□□□ 1.18
SMAD1-201ENST00000302085 CCT6BQ92526 530 aa22.45■■□□□ 1.18
SMAD1-201ENST00000302085 HDAC10Q969S8 669 aa22.45■■□□□ 1.18
SMAD1-201ENST00000302085 TASP1Q9H6P5 420 aa22.45■■□□□ 1.18
SMAD1-201ENST00000302085 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.45■■□□□ 1.18
SMAD1-201ENST00000302085 ARL5AQ9Y689 179 aa22.45■■□□□ 1.18
SMAD1-201ENST00000302085 PER2O15055 1255 aa22.44■■□□□ 1.18
SMAD1-201ENST00000302085 KIAA0754O94854 1291 aa22.44■■□□□ 1.18
SMAD1-201ENST00000302085 PROCP04070 461 aa22.44■■□□□ 1.18
SMAD1-201ENST00000302085 NTHL1P78549 312 aa22.44■■□□□ 1.18
SMAD1-201ENST00000302085 RNF43Q68DV7 783 aa22.44■■□□□ 1.18
SMAD1-201ENST00000302085 CLEC14AQ86T13 490 aa22.44■■□□□ 1.18
SMAD1-201ENST00000302085 USP13Q92995 863 aaPredicted RBP22.44■■□□□ 1.18
SMAD1-201ENST00000302085 TDRD1Q9BXT4 1180 aaKnown RBP22.44■■□□□ 1.18
SMAD1-201ENST00000302085 FCF1Q9Y324 198 aaKnown RBP22.44■■□□□ 1.18
SMAD1-201ENST00000302085 ARIH1Q9Y4X5 557 aaPredicted RBP22.44■■□□□ 1.18
SMAD1-201ENST00000302085 PCDHGC4Q9Y5F7 938 aa22.44■■□□□ 1.18
SMAD1-201ENST00000302085 SLC7A4O43246 635 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 HAUS5O94927 633 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 CA3P07451 260 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 PDHA1P08559 390 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 DDX6P26196 483 aaKnown RBP eCLIP22.43■■□□□ 1.18
SMAD1-201ENST00000302085 HOXA9P31269 272 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 AVPR1AP37288 418 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 PGGT1BP53609 377 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 IRF9Q00978 393 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 ACVR1Q04771 509 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 NSUN2Q08J23 767 aaKnown RBP eCLIP22.43■■□□□ 1.18
SMAD1-201ENST00000302085 PTPRCAPQ14761 206 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 NCEH1Q6PIU2 408 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 OTUD6BQ8N6M0 293 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 FIBINQ8TAL6 211 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 TSSK1BQ9BXA7 367 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 SPO11Q9Y5K1 396 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 RAI2Q9Y5P3 530 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 NOTCH4Q99466 2003 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 K7ERQ8 282 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 AURKAO14965 403 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 BUD23O43709 281 aaKnown RBP22.43■■□□□ 1.18
SMAD1-201ENST00000302085 HNRNPA1P09651 372 aaKnown RBP eCLIP22.43■■□□□ 1.18
SMAD1-201ENST00000302085 LMAN2Q12907 356 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 LAMB3Q13751 1172 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 USP10Q14694 798 aaKnown RBP22.43■■□□□ 1.18
SMAD1-201ENST00000302085 ZNF697Q5TEC3 545 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 KIAA0408Q6ZU52 694 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 CCDC121Q6ZUS5 278 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 SLC41A1Q8IVJ1 513 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 TRIM42Q8IWZ5 723 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 CALML6Q8TD86 181 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 E2F7Q96AV8 911 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 MFSD1Q9H3U5 465 aa22.43■■□□□ 1.18
SMAD1-201ENST00000302085 GSTA1P08263 222 aa22.42■■□□□ 1.18
SMAD1-201ENST00000302085 CD70P32970 193 aa22.42■■□□□ 1.18
SMAD1-201ENST00000302085 OVGP1Q12889 678 aa22.42■■□□□ 1.18
SMAD1-201ENST00000302085 CHI3L2Q15782 390 aa22.42■■□□□ 1.18
SMAD1-201ENST00000302085 ARHGAP15Q53QZ3 475 aa22.42■■□□□ 1.18
SMAD1-201ENST00000302085 ZNF789Q5FWF6 425 aa22.42■■□□□ 1.18
SMAD1-201ENST00000302085 PTAR1Q7Z6K3 402 aaPredicted RBP22.42■■□□□ 1.18
SMAD1-201ENST00000302085 PNPLA1Q8N8W4 532 aa22.42■■□□□ 1.18
SMAD1-201ENST00000302085 OR6P1Q8NGX9 317 aa22.42■■□□□ 1.18
SMAD1-201ENST00000302085 DNAJC1Q96KC8 554 aaKnown RBP22.42■■□□□ 1.18
SMAD1-201ENST00000302085 TBATAQ96M53 351 aa22.42■■□□□ 1.18
SMAD1-201ENST00000302085 KIAA1522Q9P206 1035 aaPredicted RBP22.42■■□□□ 1.18
SMAD1-201ENST00000302085 SAT1P21673 171 aa22.41■■□□□ 1.18
SMAD1-201ENST00000302085 ALDH3A1P30838 453 aa22.41■■□□□ 1.18
SMAD1-201ENST00000302085 CD151P48509 253 aa22.41■■□□□ 1.18
SMAD1-201ENST00000302085 POLD2P49005 469 aa22.41■■□□□ 1.18
SMAD1-201ENST00000302085 CORO7P57737 925 aa22.41■■□□□ 1.18
SMAD1-201ENST00000302085 RHOAP61586 193 aa22.41■■□□□ 1.18
SMAD1-201ENST00000302085 TMPRSS15P98073 1019 aa22.41■■□□□ 1.18
SMAD1-201ENST00000302085 TRAF2Q12933 501 aa22.41■■□□□ 1.18
SMAD1-201ENST00000302085 FASTKD1Q53R41 847 aaKnown RBP22.41■■□□□ 1.18
SMAD1-201ENST00000302085 PRSS36Q5K4E3 855 aa22.41■■□□□ 1.18
SMAD1-201ENST00000302085 CNSTQ6PJW8 725 aa22.41■■□□□ 1.18
SMAD1-201ENST00000302085 TRPM8Q7Z2W7 1104 aa22.41■■□□□ 1.18
SMAD1-201ENST00000302085 PEX13Q92968 403 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms