RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 CD3EAPO15446 510 aaKnown RBP13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PSME3P61289 254 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 AUHQ13825 339 aaKnown RBP13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CAPSQ13938 189 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 DACT2Q5SW24 774 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 AFTPHQ6ULP2 937 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 OR52L1Q8NGH7 329 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CKAP2Q8WWK9 683 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 LENG9Q96B70 501 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 SLC47A1Q96FL8 570 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PPP1R16AQ96I34 528 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 TRIT1Q9H3H1 467 aaKnown RBP13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 UBAP1Q9NZ09 502 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 MTF2Q9Y483 593 aaPredicted RBP13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ABHD14A-ACY1A0A1B0GW23 586 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 LIN7AO14910 233 aaPredicted RBP13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ZW10O43264 779 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CHN2P52757 468 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 RAB10P61026 200 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ITGB3BPQ13352 177 aaPredicted RBP13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 RFX4Q33E94 735 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CMC1Q7Z7K0 106 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 FAM83AQ86UY5 434 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 KLHL23Q8NBE8 558 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PIGKQ92643 395 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CDH9Q9ULB4 789 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 MANSC4A6NHS7 340 aaPredicted RBP13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 TAF4O00268 1085 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 MDM4O15151 490 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 OR4Q2P0C623 313 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ITGA3P26006 1051 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 MC4RP32245 332 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 FMO1Q01740 532 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ATG14Q6ZNE5 492 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 FAM220AQ7Z4H9 259 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 SAMD3Q8N6K7 520 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 MAB21L3Q8N8X9 362 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 HAS1Q92839 578 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PDCD10Q9BUL8 212 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 TNKS2Q9H2K2 1166 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 TMEM138Q9NPI0 162 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CLN6Q9NWW5 311 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 DIP2BQ9P265 1576 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 NEDD8-MDP1E9PL57 170 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 OR10H3O60404 316 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 TCEA3O75764 348 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 BRCC3P46736 316 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CDC42P60953 191 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 MAPKAPK3Q16644 382 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 KRT73Q86Y46 540 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 TMEM86AQ8N2M4 240 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 RNF157Q96PX1 679 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 B3GNT5Q9BYG0 378 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 SLC35C2Q9NQQ7 365 aa13.65□□□□□ -0.22
CHRFAM7A-201ENST00000299847 IQCF5A8MTL0 148 aa13.65□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PSIP1O75475 530 aaKnown RBP13.65□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ATP4AP20648 1035 aa13.65□□□□□ -0.23
CHRFAM7A-201ENST00000299847 AQP1P29972 269 aa13.65□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PTDSS1P48651 473 aaKnown RBP13.65□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PDK3Q15120 406 aa13.65□□□□□ -0.23
CHRFAM7A-201ENST00000299847 GPR107Q5VW38 600 aa13.65□□□□□ -0.23
CHRFAM7A-201ENST00000299847 RAB21Q9UL25 225 aa13.65□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ZNF232Q9UNY5 417 aa13.65□□□□□ -0.23
CHRFAM7A-201ENST00000299847 IRF6O14896 467 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 MAGP20916 626 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ITPKAP23677 461 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CDH13P55290 713 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 MTX3Q5HYI7 312 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CERCAMQ5T4B2 595 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 GK5Q6ZS86 529 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 RASAL3Q86YV0 1011 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 MAGEC3Q8TD91 643 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SOCS4Q8WXH5 440 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 C18orf25Q96B23 403 aaPredicted RBP13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 QKIQ96PU8 341 aaKnown RBP eCLIP13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CDT1Q9H211 546 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SLCO1B3Q9NPD5 702 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CD84Q9UIB8 345 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 VPS4AQ9UN37 437 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SH3GLB1Q9Y371 365 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 FGF10O15520 208 aaPredicted RBP13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SSNA1O43805 119 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SLC28A2O43868 658 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PSMD10O75832 226 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 BST1Q10588 318 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 NR1D2Q14995 579 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ZNHIT3Q15649 155 aaPredicted RBP13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CHPFQ8IZ52 775 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 AHI1Q8N157 1196 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 STK40Q8N2I9 435 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 FBXW8Q8N3Y1 598 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 HDAC10Q969S8 669 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PRDM12Q9H4Q4 367 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ASAH2Q9NR71 780 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TRMT13Q9NUP7 481 aaKnown RBP13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SLC17A7Q9P2U7 560 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ANPEPP15144 967 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CCT3P49368 545 aaKnown RBP13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 NAB1Q13506 487 aa13.64□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PIWIL2Q8TC59 973 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms