RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 CADM3Q8N126 398 aa13.61□□□□□ -0.23
RPUSD4-201ENST00000298317 DHRSXQ8N5I4 330 aa13.61□□□□□ -0.23
RPUSD4-201ENST00000298317 ROPN1LQ96C74 230 aa13.61□□□□□ -0.23
RPUSD4-201ENST00000298317 WNK4Q96J92 1243 aa13.61□□□□□ -0.23
RPUSD4-201ENST00000298317 GPR78Q96P69 363 aa13.61□□□□□ -0.23
RPUSD4-201ENST00000298317 NDEL1Q9GZM8 345 aa13.61□□□□□ -0.23
RPUSD4-201ENST00000298317 TMEM39BQ9GZU3 492 aa13.61□□□□□ -0.23
RPUSD4-201ENST00000298317 RHOJQ9H4E5 214 aa13.61□□□□□ -0.23
RPUSD4-201ENST00000298317 PKD2L2Q9NZM6 624 aa13.61□□□□□ -0.23
RPUSD4-201ENST00000298317 SEPT10Q9P0V9 454 aa13.61□□□□□ -0.23
RPUSD4-201ENST00000298317 IFT80Q9P2H3 777 aaPredicted RBP13.61□□□□□ -0.23
RPUSD4-201ENST00000298317 ABCD2Q9UBJ2 740 aa13.61□□□□□ -0.23
RPUSD4-201ENST00000298317 DKK3Q9UBP4 350 aa13.61□□□□□ -0.23
RPUSD4-201ENST00000298317 KIAA1257Q9ULG3 409 aa13.61□□□□□ -0.23
RPUSD4-201ENST00000298317 DYTNA2CJ06 578 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 USP12O75317 370 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 GABBR2O75899 941 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 IL10P22301 178 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 PSMA4P25789 261 aaKnown RBP13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 C1QTNF8P60827 252 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 DMPKQ09013 629 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 USP10Q14694 798 aaKnown RBP13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 PSMD5Q16401 504 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 PHKG1Q16816 387 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 PPP1R3AQ16821 1122 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 LCN8Q6JVE9 175 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 PYROXD2Q8N2H3 581 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 MINDY2Q8NBR6 621 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 NETO2Q8NC67 525 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 USP33Q8TEY7 942 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 SNX19Q92543 992 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 NACC2Q96BF6 587 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 FAR2Q96K12 515 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 MYRFLQ96LU7 910 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 GLT1D1Q96MS3 346 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 CSF3RQ99062 836 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 SH3GL1Q99961 368 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 TBC1D13Q9NVG8 400 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 GTSE1Q9NYZ3 720 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 GPRC5DQ9NZD1 345 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 RCOR3Q9P2K3 495 aaPredicted RBP13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 NME4O00746 187 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 KDM1AO60341 852 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 JRKO75564 520 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 OPRL1P41146 370 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 AGAP7PQ5VUJ5 663 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 GTF2IRD2BQ6EKJ0 949 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 BTLAQ7Z6A9 289 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 GTF2IRD2Q86UP8 949 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 PSTKQ8IV42 348 aaKnown RBP13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 ZBTB8OSQ8IWT0 167 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 ADGRG5Q8IZF4 528 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 TMCO5AQ8N6Q1 288 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 C12orf29Q8N999 325 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 TXNDC5Q8NBS9 432 aaKnown RBP13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 ABHD11Q8NFV4 315 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 NSMCE3Q96MG7 304 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 RHOBTB2Q9BYZ6 727 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 MRPL46Q9H2W6 279 aaKnown RBP13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 RPF1Q9H9Y2 349 aaKnown RBP13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 FANCEQ9HB96 536 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 FAM49BQ9NUQ9 324 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 CARD8Q9Y2G2 431 aa13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 MTF2Q9Y483 593 aaPredicted RBP13.6□□□□□ -0.23
RPUSD4-201ENST00000298317 CLDN25C9JDP6 229 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 VWA5AO00534 786 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 EIF2S1P05198 315 aaKnown RBP13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 HPCAL1P37235 193 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 AVPR1AP37288 418 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 ARL4AP40617 200 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 DNAJB13P59910 316 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 ZNF846Q147U1 533 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 KCNJ8Q15842 424 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 ZNF618Q5T7W0 954 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 ATF7IP2Q5U623 682 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 EEF1DP3Q658K8 133 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 XAF1Q6GPH4 301 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 SLC26A9Q7LBE3 791 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 ZDHHC17Q8IUH5 632 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 SPPL2CQ8IUH8 684 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 RNF149Q8NC42 400 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 OR9I1Q8NGQ6 314 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 ZC3H15Q8WU90 426 aaKnown RBP13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 SH3YL1Q96HL8 342 aaPredicted RBP13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 PCYT2Q99447 389 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 B3GNT5Q9BYG0 378 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 RAD21L1Q9H4I0 556 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 MRM3Q9HC36 420 aaKnown RBP13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 PARP14Q460N5 1801 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 TRIP11Q15643 1979 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 TTC24A2A3L6 582 aaPredicted RBP13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 PFDN6O15212 129 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 TPST1O60507 370 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 KCNH1O95259 989 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 ALOX5P09917 674 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 HSD17B1P14061 328 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 SAT1P21673 171 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 TKTP29401 623 aaKnown RBP13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 OXTRP30559 389 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 RPS9P46781 194 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms