RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 PPP2R2DQ66LE6 453 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 MPP5Q8N3R9 675 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 DCAKDQ8WVC6 231 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 C7orf43Q8WVR3 580 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 MFSD3Q96ES6 412 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 ZFYVE19Q96K21 471 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 AKAP12Q02952 1782 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 MOXD2PA6NHM9 499 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 KCNU1A8MYU2 1149 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 CLDN5O00501 218 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 H2AFYO75367 372 aaKnown RBP13.53□□□□□ -0.24
HPS3-201ENST00000296051 IGSF6O95976 241 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 CCDC166P0CW27 439 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 NPR3P17342 541 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 NFKB1P19838 968 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 CDH15P55291 814 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 OGDHQ02218 1023 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 AARS2Q5JTZ9 985 aaKnown RBP13.53□□□□□ -0.24
HPS3-201ENST00000296051 IGDCC3Q8IVU1 814 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 ARL10Q8N8L6 244 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 P2RY11Q96G91 374 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 SLC25A23Q9BV35 468 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 ABCC13Q9NSE7 274 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 TMCO1Q9UM00 188 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 LTN1O94822 1766 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 TLR5O60602 858 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 ZNF682O95780 498 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 CCDC159P0C7I6 412 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 CKMT2P17540 419 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 PSMD7P51665 324 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 MOGSQ13724 837 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 FBXO48Q5FWF7 155 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 CAMK1DQ8IU85 385 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 OFCC1Q8IZS5 231 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 TNIP2Q8NFZ5 429 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 MYLPFQ96A32 169 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 UROC1Q96N76 676 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 GPR88Q9GZN0 384 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 PCDHAC1Q9H158 963 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 ZDHHC6Q9H6R6 413 aa13.53□□□□□ -0.24
HPS3-201ENST00000296051 MFN2O95140 757 aa13.52□□□□□ -0.24
HPS3-201ENST00000296051 RPL9P32969 192 aaKnown RBP13.52□□□□□ -0.24
HPS3-201ENST00000296051 LBX1P52954 281 aa13.52□□□□□ -0.24
HPS3-201ENST00000296051 BOP1Q14137 746 aaKnown RBP13.52□□□□□ -0.24
HPS3-201ENST00000296051 PHKG1Q16816 387 aa13.52□□□□□ -0.24
HPS3-201ENST00000296051 ABHD15Q6UXT9 468 aa13.52□□□□□ -0.24
HPS3-201ENST00000296051 FAM124AQ86V42 546 aa13.52□□□□□ -0.24
HPS3-201ENST00000296051 RP9Q8TA86 221 aaKnown RBP13.52□□□□□ -0.24
HPS3-201ENST00000296051 DLG3Q92796 817 aa13.52□□□□□ -0.24
HPS3-201ENST00000296051 C18orf25Q96B23 403 aaPredicted RBP13.52□□□□□ -0.24
HPS3-201ENST00000296051 VTI1BQ9UEU0 232 aa13.52□□□□□ -0.24
HPS3-201ENST00000296051 NDOR1Q9UHB4 597 aa13.52□□□□□ -0.24
HPS3-201ENST00000296051 DNMT3LQ9UJW3 386 aa13.52□□□□□ -0.24
HPS3-201ENST00000296051 DMTF1Q9Y222 760 aa13.52□□□□□ -0.24
HPS3-201ENST00000296051 C5orf58C9J3I9 102 aa13.52□□□□□ -0.24
HPS3-201ENST00000296051 TRIM38O00635 465 aa13.52□□□□□ -0.24
HPS3-201ENST00000296051 IDH3AP50213 366 aa13.52□□□□□ -0.24
HPS3-201ENST00000296051 PHTF2Q8N3S3 785 aa13.52□□□□□ -0.24
HPS3-201ENST00000296051 FBXO30Q8TB52 745 aa13.52□□□□□ -0.24
HPS3-201ENST00000296051 LPGAT1Q92604 370 aa13.52□□□□□ -0.24
HPS3-201ENST00000296051 CD101Q93033 1021 aa13.52□□□□□ -0.24
HPS3-201ENST00000296051 FAR2Q96K12 515 aa13.52□□□□□ -0.24
HPS3-201ENST00000296051 GATA5Q9BWX5 397 aaPredicted RBP13.52□□□□□ -0.24
HPS3-201ENST00000296051 UBA2Q9UBT2 640 aaPredicted RBP13.52□□□□□ -0.24
HPS3-201ENST00000296051 CDH9Q9ULB4 789 aa13.52□□□□□ -0.24
HPS3-201ENST00000296051 BTRCQ9Y297 605 aa13.52□□□□□ -0.24
HPS3-201ENST00000296051 RAP2CQ9Y3L5 183 aa13.52□□□□□ -0.24
HPS3-201ENST00000296051 PLA2G6O60733 806 aa13.52□□□□□ -0.25
HPS3-201ENST00000296051 DDX5P17844 614 aaKnown RBP13.52□□□□□ -0.25
HPS3-201ENST00000296051 TFEBP19484 476 aa13.52□□□□□ -0.25
HPS3-201ENST00000296051 VAC14Q08AM6 782 aa13.52□□□□□ -0.25
HPS3-201ENST00000296051 PPP1R26Q5T8A7 1209 aaPredicted RBP13.52□□□□□ -0.25
HPS3-201ENST00000296051 CDHR3Q6ZTQ4 885 aa13.52□□□□□ -0.25
HPS3-201ENST00000296051 PYROXD2Q8N2H3 581 aa13.52□□□□□ -0.25
HPS3-201ENST00000296051 UTP4Q969X6 686 aaKnown RBP13.52□□□□□ -0.25
HPS3-201ENST00000296051 AHCYL2Q96HN2 611 aaKnown RBP13.52□□□□□ -0.25
HPS3-201ENST00000296051 PLGRKTQ9HBL7 147 aa13.52□□□□□ -0.25
HPS3-201ENST00000296051 LIMD1Q9UGP4 676 aa13.52□□□□□ -0.25
HPS3-201ENST00000296051 H3BSA7 217 aa13.52□□□□□ -0.25
HPS3-201ENST00000296051 HS6ST1O60243 411 aa13.52□□□□□ -0.25
HPS3-201ENST00000296051 METTL18O95568 372 aa13.52□□□□□ -0.25
HPS3-201ENST00000296051 CHRNGP07510 517 aa13.52□□□□□ -0.25
HPS3-201ENST00000296051 RBP1P09455 135 aa13.52□□□□□ -0.25
HPS3-201ENST00000296051 CCL5P13501 91 aa13.52□□□□□ -0.25
HPS3-201ENST00000296051 WASP42768 502 aa13.52□□□□□ -0.25
HPS3-201ENST00000296051 NR2C2P49116 596 aa13.52□□□□□ -0.25
HPS3-201ENST00000296051 TRIM25Q14258 630 aaKnown RBP13.52□□□□□ -0.25
HPS3-201ENST00000296051 NR6A1Q15406 480 aa13.52□□□□□ -0.25
HPS3-201ENST00000296051 NAT8LQ8N9F0 302 aa13.52□□□□□ -0.25
HPS3-201ENST00000296051 LMO3Q8TAP4 145 aa13.52□□□□□ -0.25
HPS3-201ENST00000296051 SLC35B2Q8TB61 432 aa13.52□□□□□ -0.25
HPS3-201ENST00000296051 LRTOMTQ8WZ04 291 aa13.52□□□□□ -0.25
HPS3-201ENST00000296051 EIF2AQ9BY44 585 aaKnown RBP13.52□□□□□ -0.25
HPS3-201ENST00000296051 SEMA4BQ9NPR2 832 aaPredicted RBP13.52□□□□□ -0.25
HPS3-201ENST00000296051 ZNF180Q9UJW8 692 aa13.52□□□□□ -0.25
HPS3-201ENST00000296051 IGKV6D-41A0A0C4DH26 115 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 CCDC189A1A4V9 331 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 SNRPB2P08579 225 aaKnown RBP13.51□□□□□ -0.25
HPS3-201ENST00000296051 ALOX15P16050 662 aaPredicted RBP13.51□□□□□ -0.25
HPS3-201ENST00000296051 GM2AP17900 193 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms