RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 ARPINQ7Z6K5 226 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 SUSD3Q96L08 255 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 CLDND1Q9NY35 253 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 CROTQ9UKG9 612 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 ZNF711Q9Y462 761 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 ZFP37Q9Y6Q3 630 aaPredicted RBP17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 GSAPA4D1B5 854 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 DNM1LO00429 736 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 LMO2P25791 158 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 JAG1P78504 1218 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 NPY5RQ15761 445 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 TRIM60Q495X7 471 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 CRTC3Q6UUV7 619 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 SCUBE1Q8IWY4 988 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 SLC9A7Q96T83 725 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 DHX15O43143 795 aaKnown RBP17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 HS6ST1O60243 411 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 IFNA16P05015 189 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 HNRNPCP07910 306 aaKnown RBP eCLIP17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 ABHD2P08910 425 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 AP1S1P61966 158 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 RGS1Q08116 209 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 CCDC85BQ15834 202 aaPredicted RBP17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 CNSTQ6PJW8 725 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 CYP4X1Q8N118 509 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 ZFP28Q8NHY6 868 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 HERVK_113Q902F9 699 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 HAO1Q9UJM8 370 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 APOA1P02647 267 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 CCDC159P0C7I6 412 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 FCGR1AP12314 374 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 RPL14P50914 215 aaKnown RBP17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 AUHQ13825 339 aaKnown RBP17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 ASZ1Q8WWH4 475 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 KCTD15Q96SI1 283 aaPredicted RBP17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 EXOSC4Q9NPD3 245 aaKnown RBP17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 USP1O94782 785 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 COX7A2P14406 83 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 CCT8P50990 548 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 RAVER1Q8IY67 606 aaKnown RBP17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 LRIG2O94898 1065 aa17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 GSNP06396 782 aa17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 PABPC1P11940 636 aaKnown RBP17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 RPS7P62081 194 aaKnown RBP17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 KIAA2013Q8IYS2 634 aa17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 NDNQ99608 321 aa17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 GLYATL1P3A0A0U1RQE8 302 aa17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 CDK14O94921 469 aa17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 LBPP18428 481 aa17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 NAGLUP54802 743 aa17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 RUNX1T1Q06455 604 aa17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 CRYMQ14894 314 aa17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 ZNHIT3Q15649 155 aaPredicted RBP17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 TXNDC11Q6PKC3 985 aa17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 WFIKKN2Q8TEU8 576 aa17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 SYBUQ9NX95 663 aa17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 AP3M1Q9Y2T2 418 aa17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 PRMT5O14744 637 aaPredicted RBP17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 ULK1O75385 1050 aa17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 VAC14Q08AM6 782 aa17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 NSMCE2Q96MF7 247 aa17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 MRPL57Q9BQC6 102 aaKnown RBP17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 HEPHQ9BQS7 1158 aa17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 CLIC5Q9NZA1 410 aa17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 SNAI1O95863 264 aaPredicted RBP17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 ADSSP30520 456 aa17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 RPL3P39023 403 aaKnown RBP17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 NDST2P52849 883 aa17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 C16orf46Q6P387 395 aa17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 DNAJB7Q7Z6W7 309 aaPredicted RBP17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 SPPL2AQ8TCT8 520 aa17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 AENQ8WTP8 325 aaKnown RBP17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 SLC25A23Q9BV35 468 aa17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 KCTD5Q9NXV2 234 aa17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 GABRQQ9UN88 632 aa17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 DUOX1Q9NRD9 1551 aa17.8■□□□□ 0.44
CDC42EP3-201ENST00000295324 RCCD1A6NED2 376 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 IDSP22304 550 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 RIPOR1Q6ZS17 1223 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 CLYBLQ8N0X4 340 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 MRPL48Q96GC5 212 aaKnown RBP17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 TMEM237Q96Q45 408 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 PTPRHQ9HD43 1115 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 GULP1Q9UBP9 304 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 ZNF229Q9UJW7 825 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 PAPSS1O43252 624 aaPredicted RBP17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 PBX3P40426 434 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 FOXR1Q6PIV2 292 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 CERS6Q6ZMG9 384 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 ZNF621Q6ZSS3 439 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 ANKS1BQ7Z6G8 1248 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 EFCAB3Q8N7B9 438 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 ATXN2LQ8WWM7 1075 aaKnown RBP17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 DNAJC1Q96KC8 554 aaKnown RBP17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 IMP3Q9NV31 184 aaKnown RBP17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 YIPF1Q9Y548 306 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 FAM220BPB1ANY3 271 aa17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 IFI35P80217 286 aaPredicted RBP17.79■□□□□ 0.44
CDC42EP3-201ENST00000295324 MRPS15P82914 257 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms