RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 PIGGQ5H8A4 983 aa12.16□□□□□ -0.46
CLPB-201ENST00000294053 ARL13AQ5H913 290 aaPredicted RBP12.16□□□□□ -0.46
CLPB-201ENST00000294053 METTL21CQ5VZV1 264 aa12.16□□□□□ -0.46
CLPB-201ENST00000294053 STRA8Q7Z7C7 330 aa12.16□□□□□ -0.46
CLPB-201ENST00000294053 RTP4Q96DX8 246 aa12.16□□□□□ -0.46
CLPB-201ENST00000294053 SIGLEC10Q96LC7 697 aa12.16□□□□□ -0.46
CLPB-201ENST00000294053 RANBP9Q96S59 729 aa12.16□□□□□ -0.46
CLPB-201ENST00000294053 NEURL2Q9BR09 285 aa12.16□□□□□ -0.46
CLPB-201ENST00000294053 OSBPL11Q9BXB4 747 aa12.16□□□□□ -0.46
CLPB-201ENST00000294053 EPS8L2Q9H6S3 715 aa12.16□□□□□ -0.46
CLPB-201ENST00000294053 FADS3Q9Y5Q0 445 aa12.16□□□□□ -0.46
CLPB-201ENST00000294053 RALGAPA2Q2PPJ7 1873 aa12.15□□□□□ -0.46
CLPB-201ENST00000294053 SHROOM3Q8TF72 1996 aa12.15□□□□□ -0.46
CLPB-201ENST00000294053 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.15□□□□□ -0.46
CLPB-201ENST00000294053 ATP6AP2A0A1C7CYW4 349 aa12.15□□□□□ -0.46
CLPB-201ENST00000294053 SOCS2O14508 198 aa12.15□□□□□ -0.46
CLPB-201ENST00000294053 HTRA2O43464 458 aaPredicted RBP12.15□□□□□ -0.46
CLPB-201ENST00000294053 ATP6AP2O75787 350 aa12.15□□□□□ -0.46
CLPB-201ENST00000294053 ZNF865P0CJ78 1059 aaPredicted RBP12.15□□□□□ -0.46
CLPB-201ENST00000294053 PSME3P61289 254 aa12.15□□□□□ -0.46
CLPB-201ENST00000294053 DNASE1L3Q13609 305 aa12.15□□□□□ -0.46
CLPB-201ENST00000294053 ZNF829Q3KNS6 432 aaPredicted RBP12.15□□□□□ -0.46
CLPB-201ENST00000294053 AGKQ53H12 422 aa12.15□□□□□ -0.46
CLPB-201ENST00000294053 ARHGAP17Q68EM7 881 aa12.15□□□□□ -0.46
CLPB-201ENST00000294053 HEATR6Q6AI08 1181 aaKnown RBP12.15□□□□□ -0.46
CLPB-201ENST00000294053 EPGNQ6UW88 154 aa12.15□□□□□ -0.46
CLPB-201ENST00000294053 CHERPQ8IWX8 916 aaKnown RBP12.15□□□□□ -0.46
CLPB-201ENST00000294053 C3orf58Q8NDZ4 430 aa12.15□□□□□ -0.46
CLPB-201ENST00000294053 CENPIQ92674 756 aaPredicted RBP12.15□□□□□ -0.46
CLPB-201ENST00000294053 TSNARE1Q96NA8 513 aa12.15□□□□□ -0.46
CLPB-201ENST00000294053 AGAP2Q99490 1192 aa12.15□□□□□ -0.46
CLPB-201ENST00000294053 ZFYVE28Q9HCC9 887 aa12.15□□□□□ -0.46
CLPB-201ENST00000294053 PIGVQ9NUD9 493 aa12.15□□□□□ -0.46
CLPB-201ENST00000294053 PRPF19Q9UMS4 504 aaKnown RBP12.15□□□□□ -0.46
CLPB-201ENST00000294053 USP3Q9Y6I4 520 aa12.15□□□□□ -0.46
CLPB-201ENST00000294053 PDCD11Q14690 1871 aaKnown RBP12.15□□□□□ -0.46
CLPB-201ENST00000294053 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.15□□□□□ -0.46
CLPB-201ENST00000294053 B4GAT1O43505 415 aa12.15□□□□□ -0.46
CLPB-201ENST00000294053 TRIM13O60858 407 aa12.15□□□□□ -0.46
CLPB-201ENST00000294053 MAGP20916 626 aa12.15□□□□□ -0.46
CLPB-201ENST00000294053 TAF6P49848 677 aa12.15□□□□□ -0.46
CLPB-201ENST00000294053 ADAM17P78536 824 aa12.15□□□□□ -0.46
CLPB-201ENST00000294053 PFKPQ01813 784 aa12.15□□□□□ -0.46
CLPB-201ENST00000294053 SPRYD7Q5W111 196 aa12.15□□□□□ -0.46
CLPB-201ENST00000294053 RPS27LQ71UM5 84 aaKnown RBP12.15□□□□□ -0.46
CLPB-201ENST00000294053 TMEM102Q8N9M5 508 aaPredicted RBP12.15□□□□□ -0.46
CLPB-201ENST00000294053 ZNF669Q96BR6 464 aaPredicted RBP12.15□□□□□ -0.46
CLPB-201ENST00000294053 EFHD1Q9BUP0 239 aa12.15□□□□□ -0.46
CLPB-201ENST00000294053 FRMD8Q9BZ67 464 aaPredicted RBP12.15□□□□□ -0.46
CLPB-201ENST00000294053 ADNPQ9H2P0 1102 aa12.15□□□□□ -0.46
CLPB-201ENST00000294053 FAM96AQ9H5X1 160 aa12.15□□□□□ -0.46
CLPB-201ENST00000294053 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.15□□□□□ -0.46
CLPB-201ENST00000294053 CDYLQ9Y232 598 aa12.15□□□□□ -0.46
CLPB-201ENST00000294053 SMIM35A0A1B0GVV1 85 aa12.15□□□□□ -0.47
CLPB-201ENST00000294053 RRN3P2A6NIE6 340 aa12.15□□□□□ -0.47
CLPB-201ENST00000294053 FAM159BA6NKW6 160 aa12.15□□□□□ -0.47
CLPB-201ENST00000294053 H3BMQ9 156 aa12.15□□□□□ -0.47
CLPB-201ENST00000294053 M0QYT0 321 aa12.15□□□□□ -0.47
CLPB-201ENST00000294053 CLOCKO15516 846 aa12.15□□□□□ -0.47
CLPB-201ENST00000294053 MAN1A2O60476 641 aa12.15□□□□□ -0.47
CLPB-201ENST00000294053 HUS1O60921 280 aa12.15□□□□□ -0.47
CLPB-201ENST00000294053 NCAM1P13591 858 aa12.15□□□□□ -0.47
CLPB-201ENST00000294053 TFEBP19484 476 aa12.15□□□□□ -0.47
CLPB-201ENST00000294053 PTPN9P43378 593 aa12.15□□□□□ -0.47
CLPB-201ENST00000294053 GRIA4P48058 902 aa12.15□□□□□ -0.47
CLPB-201ENST00000294053 PSEN2P49810 448 aa12.15□□□□□ -0.47
CLPB-201ENST00000294053 LSM3P62310 102 aaKnown RBP12.15□□□□□ -0.47
CLPB-201ENST00000294053 OTUD3Q5T2D3 398 aaPredicted RBP12.15□□□□□ -0.47
CLPB-201ENST00000294053 RNF19BQ6ZMZ0 732 aa12.15□□□□□ -0.47
CLPB-201ENST00000294053 C14orf80Q86SX3 495 aa12.15□□□□□ -0.47
CLPB-201ENST00000294053 UNC93AQ86WB7 457 aa12.15□□□□□ -0.47
CLPB-201ENST00000294053 CRYBG2Q8N1P7 616 aa12.15□□□□□ -0.47
CLPB-201ENST00000294053 CANT1Q8WVQ1 401 aa12.15□□□□□ -0.47
CLPB-201ENST00000294053 COG8Q96MW5 612 aa12.15□□□□□ -0.47
CLPB-201ENST00000294053 CYP4F12Q9HCS2 524 aa12.15□□□□□ -0.47
CLPB-201ENST00000294053 POLE4Q9NR33 117 aa12.15□□□□□ -0.47
CLPB-201ENST00000294053 PCDHA11Q9Y5I1 949 aa12.15□□□□□ -0.47
CLPB-201ENST00000294053 IQCA1LA6NCM1 817 aa12.14□□□□□ -0.47
CLPB-201ENST00000294053 BCL10O95999 233 aa12.14□□□□□ -0.47
CLPB-201ENST00000294053 MYL4P12829 197 aa12.14□□□□□ -0.47
CLPB-201ENST00000294053 HNRNPLP14866 589 aaKnown RBP eCLIP12.14□□□□□ -0.474e-10■■□□□ 13
CLPB-201ENST00000294053 TSPAN8P19075 237 aa12.14□□□□□ -0.47
CLPB-201ENST00000294053 CLEC20AQ6ZU45 233 aa12.14□□□□□ -0.47
CLPB-201ENST00000294053 KCTD8Q6ZWB6 473 aa12.14□□□□□ -0.47
CLPB-201ENST00000294053 HASPINQ8TF76 798 aa12.14□□□□□ -0.47
CLPB-201ENST00000294053 HNRNPABQ99729 332 aaKnown RBP12.14□□□□□ -0.47
CLPB-201ENST00000294053 HIPK3Q9H422 1215 aa12.14□□□□□ -0.47
CLPB-201ENST00000294053 MIOSQ9NXC5 875 aa12.14□□□□□ -0.47
CLPB-201ENST00000294053 SLC8A2Q9UPR5 921 aa12.14□□□□□ -0.47
CLPB-201ENST00000294053 AGRPO00253 132 aa12.14□□□□□ -0.47
CLPB-201ENST00000294053 TSHRP16473 764 aa12.14□□□□□ -0.47
CLPB-201ENST00000294053 TPH1P17752 444 aa12.14□□□□□ -0.47
CLPB-201ENST00000294053 PSMB4P28070 264 aa12.14□□□□□ -0.47
CLPB-201ENST00000294053 GARSP41250 739 aaKnown RBP12.14□□□□□ -0.47
CLPB-201ENST00000294053 CASP2P42575 452 aa12.14□□□□□ -0.47
CLPB-201ENST00000294053 MATKP42679 507 aa12.14□□□□□ -0.47
CLPB-201ENST00000294053 ZBED5Q49AG3 693 aa12.14□□□□□ -0.47
CLPB-201ENST00000294053 BORAQ6PGQ7 559 aa12.14□□□□□ -0.47
CLPB-201ENST00000294053 CHSY3Q70JA7 882 aa12.14□□□□□ -0.47
CLPB-201ENST00000294053 LZTR1Q8N653 840 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms