RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 UGP2Q16851 508 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 TMEM52BQ4KMG9 183 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 BOLA3Q53S33 107 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 HES3Q5TGS1 186 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 ARHGAP36Q6ZRI8 547 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 CAMK1DQ8IU85 385 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 TP53INP2Q8IXH6 220 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 TSEN2Q8NCE0 465 aaKnown RBP10.57□□□□□ -0.72
SNF8-201ENST00000290330 CXorf40AQ8TE69 158 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 CPLX3Q8WVH0 158 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 RFFLQ8WZ73 363 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 TUBGCP5Q96RT8 1024 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.57□□□□□ -0.72
SNF8-201ENST00000290330 WRAP53Q9BUR4 548 aaKnown RBP10.57□□□□□ -0.72
SNF8-201ENST00000290330 THAP2Q9H0W7 228 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 SUV39H2Q9H5I1 410 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 ZWILCHQ9H900 591 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 MBNL1Q9NR56 388 aaKnown RBP10.57□□□□□ -0.72
SNF8-201ENST00000290330 NLGN3Q9NZ94 848 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 IPO11Q9UI26 975 aaKnown RBP10.57□□□□□ -0.72
SNF8-201ENST00000290330 KLF15Q9UIH9 416 aa10.57□□□□□ -0.72
SNF8-201ENST00000290330 RALYQ9UKM9 306 aaKnown RBP10.57□□□□□ -0.72
SNF8-201ENST00000290330 AKAP13Q12802 2813 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 A0A087X0T9 212 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 H3BM21 787 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 K7ESM1 405 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 DFFAO00273 331 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 NEBLO76041 1014 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 FAM228BP0C875 321 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 RARAP10276 462 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 ALPPL2P10696 532 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 CKMT1AP12532 417 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 XPAP23025 273 aaPredicted RBP10.56□□□□□ -0.72
SNF8-201ENST00000290330 THOP1P52888 689 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 DAB2P98082 770 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 E2F1Q01094 437 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 INSM1Q01101 510 aaPredicted RBP10.56□□□□□ -0.72
SNF8-201ENST00000290330 IL10RBQ08334 325 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 NSUN2Q08J23 767 aaKnown RBP eCLIP10.56□□□□□ -0.72
SNF8-201ENST00000290330 ELP6Q0PNE2 266 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 EIF2B5Q13144 721 aaKnown RBP10.56□□□□□ -0.72
SNF8-201ENST00000290330 TARDBPQ13148 414 aaKnown RBP eCLIP10.56□□□□□ -0.72
SNF8-201ENST00000290330 PIGHQ14442 188 aaPredicted RBP10.56□□□□□ -0.72
SNF8-201ENST00000290330 RFTN1Q14699 578 aaPredicted RBP10.56□□□□□ -0.72
SNF8-201ENST00000290330 SMTNL2Q2TAL5 461 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 TXNRD3NBQ6F5E7 133 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 BRAT1Q6PJG6 821 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 POLNQ7Z5Q5 900 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 SRLQ86TD4 932 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 VPS36Q86VN1 386 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 ZSWIM9Q86XI8 627 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 LZTR1Q8N653 840 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 FAM181AQ8N9Y4 354 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 TP53I13Q8NBR0 393 aaPredicted RBP10.56□□□□□ -0.72
SNF8-201ENST00000290330 CCDC112Q8NEF3 446 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 ZNF548Q8NEK5 533 aaPredicted RBP10.56□□□□□ -0.72
SNF8-201ENST00000290330 IQCDQ96DY2 449 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 APOLD1Q96LR9 279 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 DUSP23Q9BVJ7 150 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 C1QTNF7Q9BXJ2 289 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 SP110Q9HB58 689 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 PCDH12Q9NPG4 1184 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 RRAGDQ9NQL2 400 aaPredicted RBP10.56□□□□□ -0.72
SNF8-201ENST00000290330 LUC7L2Q9Y383 392 aaKnown RBP10.56□□□□□ -0.72
SNF8-201ENST00000290330 CSNK1G3Q9Y6M4 447 aa10.56□□□□□ -0.72
SNF8-201ENST00000290330 GOLGA4Q13439 2230 aaKnown RBP10.56□□□□□ -0.72
SNF8-201ENST00000290330 WDFY3Q8IZQ1 3526 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 CFAP47Q6ZTR5 3102 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 LY6G6EA0A0G2JKS1 128 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 H3BRJ5 948 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 TOR1BO14657 336 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 RIOK3O14730 519 aaKnown RBP10.55□□□□□ -0.72
SNF8-201ENST00000290330 MUSKO15146 869 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 AQP9O43315 295 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 GYPCP04921 128 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 TPM1P09493 284 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 MYF5P13349 255 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 JUNDP17535 347 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 AMPD1P23109 780 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 SERPINA4P29622 427 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 EIF4A3P38919 411 aaKnown RBP10.55□□□□□ -0.72
SNF8-201ENST00000290330 ARL4AP40617 200 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 YPEL5P62699 121 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 SLC10A7Q0GE19 358 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 PTK2BQ14289 1009 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 WSCD2Q2TBF2 565 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 CFAP58Q5T655 872 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 ERAP2Q6P179 960 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 ALKBH5Q6P6C2 394 aaKnown RBP10.55□□□□□ -0.72
SNF8-201ENST00000290330 TMCO3Q6UWJ1 677 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 CACTIN-AS1Q8N1I8 211 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 NIPA2Q8N8Q9 360 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 BTN2A2Q8WVV5 523 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 TEKT4Q8WW24 435 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 HSPH1Q92598 858 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 ECHDC3Q96DC8 303 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 BTBD6Q96KE9 485 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 CSPG4P5Q96PW8 444 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 PSKH2Q96QS6 385 aa10.55□□□□□ -0.72
SNF8-201ENST00000290330 CINPQ9BW66 212 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms