RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 TRAPPC12Q8WVT3 735 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 TMCO6Q96DC7 493 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 TSPAN18Q96SJ8 248 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 OSMRQ99650 979 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 GLIS2Q9BZE0 524 aaPredicted RBP17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 SETD4Q9NVD3 440 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 NRXN3Q9Y4C0 1643 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 XRN1Q8IZH2 1706 aaKnown RBP17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 M0QX08 132 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 PDLIM1O00151 329 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 FAM92BQ6ZTR7 304 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 BANPQ8N9N5 519 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 SLC25A13Q9UJS0 675 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 PCDHB5Q9Y5E4 795 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 ZNF286BP0CG31 522 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 PSEN1P49768 467 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 PTF1AQ7RTS3 328 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 C10orf107Q8IVU9 208 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 TMEM86AQ8N2M4 240 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 YME1L1Q96TA2 773 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 SYT15Q9BQS2 421 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 TLR8Q9NR97 1041 aaKnown RBP17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 TAS2R1Q9NYW7 299 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 EPN2O95208 641 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 CNPP09543 421 aaKnown RBP17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 CCDC157Q569K6 752 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 HPS6Q86YV9 775 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 MFSD14AQ96MC6 490 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 TSEN34Q9BSV6 310 aaKnown RBP17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 FAM124BQ9H5Z6 455 aaPredicted RBP17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 SNX15Q9NRS6 342 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 ERGIC3Q9Y282 383 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 ADM5C9JUS6 153 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 MBL2P11226 248 aaPredicted RBP17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 POU1F1P28069 291 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 PEX2P28328 305 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 TUBA1BP68363 451 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 TRIM32Q13049 653 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 PRKG2Q13237 762 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 DGCR6Q14129 220 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 RUNDC3AQ59EK9 446 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 TUBA1AQ71U36 451 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 METTL6Q8TCB7 284 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 TAMM41Q96BW9 452 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 REPS1Q96D71 796 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 APBA2Q99767 749 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 APOL2Q9BQE5 337 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 TINF2Q9BSI4 451 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 ATP6V1HQ9UI12 483 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 AIF1P55008 147 aa17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 AQP4P55087 323 aa17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 ITGA7Q13683 1181 aa17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 ASTE1Q2TB18 679 aaPredicted RBP17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 VSTM1Q6UX27 236 aa17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 SPPL2AQ8TCT8 520 aa17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 ITPKCQ96DU7 683 aa17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 KLHL32Q96NJ5 620 aa17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 UBP1Q9NZI7 540 aa17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 H3BMM5 538 aa17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 PPIBP23284 216 aaKnown RBP17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 VGLL4Q14135 290 aa17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 IKZF3Q9UKT9 509 aa17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 E5RJQ4 531 aa17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 CST1P01037 141 aa17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 ALOX15P16050 662 aaPredicted RBP17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 MAPK10P53779 464 aa17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 EIF3MQ7L2H7 374 aaKnown RBP17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 HMX1Q9NP08 348 aaPredicted RBP17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 NFKB1P19838 968 aa17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 TGFBR2P37173 567 aa17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 GSTM5P46439 218 aa17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 YWHAZP63104 245 aaKnown RBP17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 KLHDC10Q6PID8 442 aa17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 APTXQ7Z2E3 356 aaKnown RBP17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 SLC44A2Q8IWA5 706 aaPredicted RBP17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 SCUBE3Q8IX30 993 aa17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 SIX5Q8N196 739 aa17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 KLHL28Q9NXS3 571 aa17.62■□□□□ 0.41
PCDHA13-201ENST00000289272 NRCAMQ92823 1304 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 G3V2T6 193 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 CAPGP40121 348 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 OVOS1Q6IE37 1185 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 TUBA3EQ6PEY2 450 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 DPP10Q8N608 796 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 ZNF557Q8N988 423 aaPredicted RBP17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 CLPTM1LQ96KA5 538 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 DISP2A7MBM2 1401 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 SLC22A1O15245 554 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 RPS9P46781 194 aaKnown RBP17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 SPATS1Q496A3 300 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 RNASEH2BQ5TBB1 312 aaKnown RBP17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 MILR1Q7Z6M3 343 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 EPHX4Q8IUS5 362 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 MLPHQ9BV36 600 aaPredicted RBP17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 ACTR8Q9H981 624 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 AHSPQ9NZD4 102 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 SSR3Q9UNL2 185 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 POMPQ9Y244 141 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 PLIN4Q96Q06 1357 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 SLC28A1O00337 649 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms