RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 SLC44A3Q8N4M1 653 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 ANKS4BQ8N8V4 417 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 TERB1Q8NA31 727 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 GLIS1Q8NBF1 620 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 ATXN2LQ8WWM7 1075 aaKnown RBP8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 LRIG1Q96JA1 1093 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 PARD6BQ9BYG5 372 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 TBK1Q9UHD2 729 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 TP73O15350 636 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 SOCS5O75159 536 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 IGSF6O95976 241 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 EPOP01588 193 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 JCHAINP01591 159 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 NFKB1P19838 968 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 ITGA8P53708 1063 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 RPL26P61254 145 aaKnown RBP8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 SLC10A7Q0GE19 358 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 NAA25Q14CX7 972 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 NAPEPLDQ6IQ20 393 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 C22orf39Q6P5X5 142 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 LRRC8BQ6P9F7 803 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 CNTD1Q8N815 330 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 FLCNQ8NFG4 579 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 ULK4Q96C45 1275 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 LRRC39Q96DD0 335 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 VPS39Q96JC1 886 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 FEM1CQ96JP0 617 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 FAM153AQ9UHL3 310 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 SLC13A4Q9UKG4 626 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 RPL26L1Q9UNX3 145 aaKnown RBP8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 ZNF106Q9H2Y7 1883 aaKnown RBP8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 TSPAN11A1L157 253 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 E5RI56 91 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 E7ESA3 106 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 SYF2O95926 243 aaKnown RBP8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 DLDP09622 509 aaKnown RBP8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 CHRM1P11229 460 aaPredicted RBP8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 SRCP12931 536 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 ETS1P14921 441 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 DRD1P21728 446 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 SLC7A5Q01650 507 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 PRKCQQ04759 706 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 TDGQ13569 410 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 TTC19Q6DKK2 380 aaPredicted RBP8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 NCEH1Q6PIU2 408 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 PID1Q7Z2X4 250 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 PGBD5Q8N414 524 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 MREGQ8N565 214 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 ARRDC2Q8TBH0 407 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 CHFRQ96EP1 664 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 ZNF419Q96HQ0 510 aaPredicted RBP8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 ETNK1Q9HBU6 452 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 MRM3Q9HC36 420 aaKnown RBP8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 LATS2Q9NRM7 1088 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 SHROOM3Q8TF72 1996 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 GOLGA8MH3BSY2 632 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 MAN2B1O00754 1011 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 MAP3K6O95382 1288 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 MMP2P08253 660 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 PSMB4P28070 264 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 ZP2Q05996 745 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 FRG1Q14331 258 aaKnown RBP8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 TBCCQ15814 346 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 PTPRNQ16849 979 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 KDELC1Q6UW63 502 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 TRMT11Q7Z4G4 463 aaKnown RBP8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 GIMAP7Q8NHV1 300 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 PTCD2Q8WV60 388 aaKnown RBP8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 RANBP9Q96S59 729 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 P2RY13Q9BPV8 354 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 MLPHQ9BV36 600 aaPredicted RBP8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 C10orf88Q9H8K7 445 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 ARNT2Q9HBZ2 717 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 SCUBE2Q9NQ36 999 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 THAP10Q9P2Z0 257 aaPredicted RBP8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 EDDM13A0A1B0GTR0 161 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 SPECC1L-ADORA2AF8WAN1 911 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 KCNK1O00180 336 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 INSIG1O15503 277 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 METTL18O95568 372 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 SNRPD1P62314 119 aaKnown RBP8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 LAMB3Q13751 1172 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 TMEM196Q5HYL7 178 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 SRLQ86TD4 932 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 CCNJLQ8IV13 435 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 ATXN7L3BQ96GX2 97 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 TBL1YQ9BQ87 522 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 TXLNGYQ9BZA5 131 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 OSGEPL1Q9H4B0 414 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 NT5MQ9NPB1 228 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 CASS4Q9NQ75 786 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 RAB6BQ9NRW1 208 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 SNX24Q9Y343 169 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 RTTNQ86VV8 2226 aa8.51□□□□□ -1.05
PTPDC1-201ENST00000288976 OTOL1A6NHN0 477 aaPredicted RBP8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 SYNCRIPO60506 623 aaKnown RBP8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 ZSCAN5DPP0CG00 497 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 STX2P32856 288 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 PLTPP55058 493 aa8.5□□□□□ -1.05
PTPDC1-201ENST00000288976 RHOAP61586 193 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms