RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 KLF6Q99612 283 aaPredicted RBP20.67■□□□□ 0.9
RAB28-201ENST00000288723 PCDHGB2Q9Y5G2 931 aa20.67■□□□□ 0.9
RAB28-201ENST00000288723 TP53BP1Q12888 1972 aaPredicted RBP20.66■□□□□ 0.9
RAB28-201ENST00000288723 TSPAN11A1L157 253 aa20.66■□□□□ 0.9
RAB28-201ENST00000288723 RCCD1A6NED2 376 aa20.66■□□□□ 0.9
RAB28-201ENST00000288723 DFNA5O60443 496 aa20.66■□□□□ 0.9
RAB28-201ENST00000288723 KRT1P04264 644 aa20.66■□□□□ 0.9
RAB28-201ENST00000288723 SLC1A1P43005 524 aa20.66■□□□□ 0.9
RAB28-201ENST00000288723 MMP13P45452 471 aa20.66■□□□□ 0.9
RAB28-201ENST00000288723 OVGP1Q12889 678 aa20.66■□□□□ 0.9
RAB28-201ENST00000288723 BNIP3Q12983 259 aa20.66■□□□□ 0.9
RAB28-201ENST00000288723 SUZ12Q15022 739 aaKnown RBP20.66■□□□□ 0.9
RAB28-201ENST00000288723 PAF1Q8N7H5 531 aa20.66■□□□□ 0.9
RAB28-201ENST00000288723 HCAR2Q8TDS4 363 aa20.66■□□□□ 0.9
RAB28-201ENST00000288723 NOD2Q9HC29 1040 aa20.66■□□□□ 0.9
RAB28-201ENST00000288723 SALL4Q9UJQ4 1053 aa20.66■□□□□ 0.9
RAB28-201ENST00000288723 PCDHGC4Q9Y5F7 938 aa20.66■□□□□ 0.9
RAB28-201ENST00000288723 ALG6Q9Y672 507 aa20.66■□□□□ 0.9
RAB28-201ENST00000288723 TRAFD1O14545 582 aaPredicted RBP20.65■□□□□ 0.9
RAB28-201ENST00000288723 FLRT2O43155 660 aa20.65■□□□□ 0.9
RAB28-201ENST00000288723 PCDHGA12O60330 932 aa20.65■□□□□ 0.9
RAB28-201ENST00000288723 BRAT1Q6PJG6 821 aa20.65■□□□□ 0.9
RAB28-201ENST00000288723 Q6ZSR6 202 aa20.65■□□□□ 0.9
RAB28-201ENST00000288723 ABI3BPQ7Z7G0 1075 aa20.65■□□□□ 0.9
RAB28-201ENST00000288723 RHOT1Q8IXI2 618 aa20.65■□□□□ 0.9
RAB28-201ENST00000288723 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.65■□□□□ 0.9
RAB28-201ENST00000288723 NT5MQ9NPB1 228 aa20.65■□□□□ 0.9
RAB28-201ENST00000288723 SCUBE2Q9NQ36 999 aa20.65■□□□□ 0.9
RAB28-201ENST00000288723 COQ6Q9Y2Z9 468 aa20.65■□□□□ 0.9
RAB28-201ENST00000288723 REXO2Q9Y3B8 237 aaKnown RBP20.65■□□□□ 0.9
RAB28-201ENST00000288723 SHROOM3Q8TF72 1996 aa20.65■□□□□ 0.9
RAB28-201ENST00000288723 RIOK3O14730 519 aaKnown RBP20.64■□□□□ 0.9
RAB28-201ENST00000288723 MAGEC1O60732 1142 aa20.64■□□□□ 0.9
RAB28-201ENST00000288723 TOP3BO95985 862 aaKnown RBP20.64■□□□□ 0.9
RAB28-201ENST00000288723 CR2P20023 1033 aa20.64■□□□□ 0.9
RAB28-201ENST00000288723 ARRB1P49407 418 aaPredicted RBP20.64■□□□□ 0.9
RAB28-201ENST00000288723 AP1S1P61966 158 aa20.64■□□□□ 0.9
RAB28-201ENST00000288723 FOXC1Q12948 553 aa20.64■□□□□ 0.9
RAB28-201ENST00000288723 FAM182AQ5T1J6 154 aa20.64■□□□□ 0.9
RAB28-201ENST00000288723 LRRC38Q5VT99 294 aa20.64■□□□□ 0.9
RAB28-201ENST00000288723 PTAR1Q7Z6K3 402 aaPredicted RBP20.64■□□□□ 0.9
RAB28-201ENST00000288723 LRRC49Q8IUZ0 686 aa20.64■□□□□ 0.9
RAB28-201ENST00000288723 SLC22A18ASQ8N1D0 253 aa20.64■□□□□ 0.9
RAB28-201ENST00000288723 BBS5Q8N3I7 341 aa20.64■□□□□ 0.9
RAB28-201ENST00000288723 PLD5Q8N7P1 536 aa20.64■□□□□ 0.9
RAB28-201ENST00000288723 ECHDC3Q96DC8 303 aa20.64■□□□□ 0.9
RAB28-201ENST00000288723 MGME1Q9BQP7 344 aa20.64■□□□□ 0.9
RAB28-201ENST00000288723 ERVMER34-1Q9H9K5 563 aa20.64■□□□□ 0.9
RAB28-201ENST00000288723 DTLQ9NZJ0 730 aa20.64■□□□□ 0.9
RAB28-201ENST00000288723 DUSP10Q9Y6W6 482 aa20.64■□□□□ 0.9
RAB28-201ENST00000288723 A8MX80 341 aa20.64■□□□□ 0.89
RAB28-201ENST00000288723 TM7SF2O76062 418 aa20.64■□□□□ 0.89
RAB28-201ENST00000288723 HADHBP55084 474 aaKnown RBP20.64■□□□□ 0.89
RAB28-201ENST00000288723 ELP6Q0PNE2 266 aa20.64■□□□□ 0.89
RAB28-201ENST00000288723 LLGL1Q15334 1064 aa20.64■□□□□ 0.89
RAB28-201ENST00000288723 IFI16Q16666 785 aaKnown RBP20.64■□□□□ 0.89
RAB28-201ENST00000288723 TMEM52BQ4KMG9 183 aa20.64■□□□□ 0.89
RAB28-201ENST00000288723 ACRBPQ8NEB7 543 aa20.64■□□□□ 0.89
RAB28-201ENST00000288723 SAP25Q8TEE9 199 aa20.64■□□□□ 0.89
RAB28-201ENST00000288723 PDCD6IPQ8WUM4 868 aaKnown RBP20.64■□□□□ 0.89
RAB28-201ENST00000288723 LENG8Q96PV6 779 aaPredicted RBP20.64■□□□□ 0.89
RAB28-201ENST00000288723 NUDCD1Q96RS6 583 aa20.64■□□□□ 0.89
RAB28-201ENST00000288723 HEY1Q9Y5J3 304 aa20.64■□□□□ 0.89
RAB28-201ENST00000288723 HS3ST3A1Q9Y663 406 aa20.64■□□□□ 0.89
RAB28-201ENST00000288723 A6NNZ2 444 aa20.63■□□□□ 0.89
RAB28-201ENST00000288723 SDC3O75056 442 aa20.63■□□□□ 0.89
RAB28-201ENST00000288723 ITGAVP06756 1048 aa20.63■□□□□ 0.89
RAB28-201ENST00000288723 PMLP29590 882 aa20.63■□□□□ 0.89
RAB28-201ENST00000288723 HSPA9P38646 679 aaKnown RBP20.63■□□□□ 0.89
RAB28-201ENST00000288723 ITKQ08881 620 aa20.63■□□□□ 0.89
RAB28-201ENST00000288723 ODF2Q5BJF6 829 aa20.63■□□□□ 0.89
RAB28-201ENST00000288723 ERAP2Q6P179 960 aa20.63■□□□□ 0.89
RAB28-201ENST00000288723 MFSD7Q6UXD7 560 aa20.63■□□□□ 0.89
RAB28-201ENST00000288723 TEX26Q8N6G2 289 aa20.63■□□□□ 0.89
RAB28-201ENST00000288723 CCNYQ8ND76 341 aa20.63■□□□□ 0.89
RAB28-201ENST00000288723 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.63■□□□□ 0.89
RAB28-201ENST00000288723 CENPTQ96BT3 561 aa20.63■□□□□ 0.89
RAB28-201ENST00000288723 BAG1Q99933 345 aaPredicted RBP20.63■□□□□ 0.89
RAB28-201ENST00000288723 MAK16Q9BXY0 300 aaKnown RBP20.63■□□□□ 0.89
RAB28-201ENST00000288723 LUC7LQ9NQ29 371 aaKnown RBP20.63■□□□□ 0.89
RAB28-201ENST00000288723 ATP8A1Q9Y2Q0 1164 aa20.63■□□□□ 0.89
RAB28-201ENST00000288723 FPGTO14772 594 aa20.62■□□□□ 0.89
RAB28-201ENST00000288723 MATN3O15232 486 aa20.62■□□□□ 0.89
RAB28-201ENST00000288723 SPINK2P20155 84 aa20.62■□□□□ 0.89
RAB28-201ENST00000288723 EPHA8P29322 1005 aaPredicted RBP20.62■□□□□ 0.89
RAB28-201ENST00000288723 RXRGP48443 463 aa20.62■□□□□ 0.89
RAB28-201ENST00000288723 LIG3P49916 1009 aa20.62■□□□□ 0.89
RAB28-201ENST00000288723 SUOXP51687 545 aa20.62■□□□□ 0.89
RAB28-201ENST00000288723 DYNLT1P63172 113 aa20.62■□□□□ 0.89
RAB28-201ENST00000288723 HNRNPDQ14103 355 aaKnown RBP20.62■□□□□ 0.89
RAB28-201ENST00000288723 ZNF542PQ5EBM4 170 aa20.62■□□□□ 0.89
RAB28-201ENST00000288723 NPNTQ6UXI9 565 aa20.62■□□□□ 0.89
RAB28-201ENST00000288723 ZSCAN30Q86W11 494 aa20.62■□□□□ 0.89
RAB28-201ENST00000288723 RFX6Q8HWS3 928 aa20.62■□□□□ 0.89
RAB28-201ENST00000288723 PNPLA1Q8N8W4 532 aa20.62■□□□□ 0.89
RAB28-201ENST00000288723 BAHD1Q8TBE0 780 aaPredicted RBP20.62■□□□□ 0.89
RAB28-201ENST00000288723 ASB12Q8WXK4 309 aa20.62■□□□□ 0.89
RAB28-201ENST00000288723 LGMNQ99538 433 aa20.62■□□□□ 0.89
RAB28-201ENST00000288723 MBNL1Q9NR56 388 aaKnown RBP20.62■□□□□ 0.89
RAB28-201ENST00000288723 DDX56Q9NY93 547 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms