RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 SEL1L3Q68CR1 1132 aa20.05■□□□□ 0.8
TIMP4-201ENST00000287814 UBE2Q2Q8WVN8 375 aa20.05■□□□□ 0.8
TIMP4-201ENST00000287814 KLK6Q92876 244 aa20.05■□□□□ 0.8
TIMP4-201ENST00000287814 RAB7BQ96AH8 199 aa20.05■□□□□ 0.8
TIMP4-201ENST00000287814 AGAP3Q96P47 875 aa20.05■□□□□ 0.8
TIMP4-201ENST00000287814 QKIQ96PU8 341 aaKnown RBP eCLIP20.05■□□□□ 0.8
TIMP4-201ENST00000287814 VPS45Q9NRW7 570 aa20.05■□□□□ 0.8
TIMP4-201ENST00000287814 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.04■□□□□ 0.8
TIMP4-201ENST00000287814 A0A1W2PPC4 97 aa20.04■□□□□ 0.8
TIMP4-201ENST00000287814 WNT9AO14904 365 aa20.04■□□□□ 0.8
TIMP4-201ENST00000287814 MMP2P08253 660 aa20.04■□□□□ 0.8
TIMP4-201ENST00000287814 PTPN3P26045 913 aa20.04■□□□□ 0.8
TIMP4-201ENST00000287814 HOXD11P31277 338 aaPredicted RBP20.04■□□□□ 0.8
TIMP4-201ENST00000287814 SEMG2Q02383 582 aa20.04■□□□□ 0.8
TIMP4-201ENST00000287814 ZNF284Q2VY69 593 aa20.04■□□□□ 0.8
TIMP4-201ENST00000287814 RALGPS1Q5JS13 557 aa20.04■□□□□ 0.8
TIMP4-201ENST00000287814 TRIM69Q86WT6 500 aa20.04■□□□□ 0.8
TIMP4-201ENST00000287814 ZCCHC9Q8N567 271 aaKnown RBP20.04■□□□□ 0.8
TIMP4-201ENST00000287814 FSCN3Q9NQT6 498 aa20.04■□□□□ 0.8
TIMP4-201ENST00000287814 RXFP3Q9NSD7 469 aa20.04■□□□□ 0.8
TIMP4-201ENST00000287814 R3HDM2Q9Y2K5 976 aaKnown RBP20.04■□□□□ 0.8
TIMP4-201ENST00000287814 CFAP54Q96N23 3096 aa20.04■□□□□ 0.8
TIMP4-201ENST00000287814 H7C0C1 242 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 KCNK3O14649 394 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 NEBLO76041 1014 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 RBL1P28749 1068 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 ATP5OP48047 213 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 IRX4P78413 519 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 XRCC4Q13426 336 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 TEX44Q53QW1 395 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 SLC45A4Q5BKX6 768 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 NEK5Q6P3R8 708 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 BRAT1Q6PJG6 821 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 HORMAD1Q86X24 394 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 PCDH12Q9NPG4 1184 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.03■□□□□ 0.8
TIMP4-201ENST00000287814 UPK3BL1B0FP48 263 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 HACD1B0YJ81 288 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 UPK3BL2E5RIL1 263 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 ENC1O14682 589 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 PDHA1P08559 390 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 HOXD12P35452 270 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 EIF3EP60228 445 aaKnown RBP20.03■□□□□ 0.8
TIMP4-201ENST00000287814 FGL2Q14314 439 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 TMEM259Q4ZIN3 620 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 TRIM61Q5EBN2 209 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 CFAP58Q5T655 872 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 KIAA2013Q8IYS2 634 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 PDCD6IPQ8WUM4 868 aaKnown RBP20.03■□□□□ 0.8
TIMP4-201ENST00000287814 HTR3CQ8WXA8 447 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 CARD9Q9H257 536 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 TM9SF3Q9HD45 589 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 PCDHB9Q9Y5E1 797 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 RAI2Q9Y5P3 530 aa20.03■□□□□ 0.8
TIMP4-201ENST00000287814 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.03■□□□□ 0.8
TIMP4-201ENST00000287814 RIOK3O14730 519 aaKnown RBP20.02■□□□□ 0.8
TIMP4-201ENST00000287814 BCAT2O15382 392 aaPredicted RBP20.02■□□□□ 0.8
TIMP4-201ENST00000287814 TSPAN6O43657 245 aa20.02■□□□□ 0.8
TIMP4-201ENST00000287814 FZD6O60353 706 aa20.02■□□□□ 0.8
TIMP4-201ENST00000287814 SOCS5O75159 536 aa20.02■□□□□ 0.8
TIMP4-201ENST00000287814 RBP3P10745 1247 aa20.02■□□□□ 0.8
TIMP4-201ENST00000287814 PRLRP16471 622 aa20.02■□□□□ 0.8
TIMP4-201ENST00000287814 CD68P34810 354 aaPredicted RBP20.02■□□□□ 0.8
TIMP4-201ENST00000287814 PTPRRQ15256 657 aa20.02■□□□□ 0.8
TIMP4-201ENST00000287814 DUOXA1Q1HG43 343 aa20.02■□□□□ 0.8
TIMP4-201ENST00000287814 ZNF569Q5MCW4 686 aa20.02■□□□□ 0.8
TIMP4-201ENST00000287814 LAYNQ6UX15 382 aa20.02■□□□□ 0.8
TIMP4-201ENST00000287814 PRR23CQ6ZRP0 262 aa20.02■□□□□ 0.8
TIMP4-201ENST00000287814 PRPF39Q86UA1 669 aaKnown RBP20.02■□□□□ 0.8
TIMP4-201ENST00000287814 SLC13A5Q86YT5 568 aaPredicted RBP20.02■□□□□ 0.8
TIMP4-201ENST00000287814 FEM1CQ96JP0 617 aa20.02■□□□□ 0.8
TIMP4-201ENST00000287814 TEKT5Q96M29 485 aa20.02■□□□□ 0.8
TIMP4-201ENST00000287814 SLC6A18Q96N87 628 aa20.02■□□□□ 0.8
TIMP4-201ENST00000287814 DOCK9Q9BZ29 2069 aa20.02■□□□□ 0.8
TIMP4-201ENST00000287814 RALGAPA1Q6GYQ0 2036 aa20.01■□□□□ 0.79
TIMP4-201ENST00000287814 A0A1B0GTW7 788 aa20.01■□□□□ 0.79
TIMP4-201ENST00000287814 IGLON5A6NGN9 336 aa20.01■□□□□ 0.79
TIMP4-201ENST00000287814 NEMP1O14524 444 aa20.01■□□□□ 0.79
TIMP4-201ENST00000287814 SLC31A1O15431 190 aa20.01■□□□□ 0.79
TIMP4-201ENST00000287814 PRLP01236 227 aa20.01■□□□□ 0.79
TIMP4-201ENST00000287814 CFIP05156 583 aa20.01■□□□□ 0.79
TIMP4-201ENST00000287814 CES1P23141 567 aa20.01■□□□□ 0.79
TIMP4-201ENST00000287814 CXCR5P32302 372 aa20.01■□□□□ 0.79
TIMP4-201ENST00000287814 CD86P42081 329 aa20.01■□□□□ 0.79
TIMP4-201ENST00000287814 DPP6P42658 865 aa20.01■□□□□ 0.79
TIMP4-201ENST00000287814 SKOR1P84550 965 aa20.01■□□□□ 0.79
TIMP4-201ENST00000287814 SEL1L2Q5TEA6 688 aa20.01■□□□□ 0.79
TIMP4-201ENST00000287814 SLC23A3Q6PIS1 610 aa20.01■□□□□ 0.79
TIMP4-201ENST00000287814 ADAT2Q7Z6V5 191 aaKnown RBP20.01■□□□□ 0.79
TIMP4-201ENST00000287814 ZNF567Q8N184 647 aa20.01■□□□□ 0.79
TIMP4-201ENST00000287814 SLC35F6Q8N357 371 aa20.01■□□□□ 0.79
TIMP4-201ENST00000287814 SPOCK2Q92563 424 aa20.01■□□□□ 0.79
TIMP4-201ENST00000287814 SMIM14Q96QK8 99 aa20.01■□□□□ 0.79
TIMP4-201ENST00000287814 GLOD4Q9HC38 313 aa20.01■□□□□ 0.79
TIMP4-201ENST00000287814 CAPN10Q9HC96 672 aa20.01■□□□□ 0.79
TIMP4-201ENST00000287814 ANKRD36A6QL64 1941 aa20.01■□□□□ 0.79
TIMP4-201ENST00000287814 KHNYNO15037 678 aaKnown RBP20■□□□□ 0.79
TIMP4-201ENST00000287814 GDF9O60383 454 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 MMP20O60882 483 aa20■□□□□ 0.79
TIMP4-201ENST00000287814 PGLSO95336 258 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms