RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 RIOX2Q8IUF8 465 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 PDIK1LQ8N165 341 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 OR7A2PQ8NGA2 310 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 ADAM32Q8TC27 787 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 MAPK15Q8TD08 544 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 TGFBRAP1Q8WUH2 860 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 LPGAT1Q92604 370 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 RIPOR3Q96MK2 946 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 WACQ9BTA9 647 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 BTBD2Q9BX70 525 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 DGCR6LQ9BY27 220 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 GHITMQ9H3K2 345 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 DSN1Q9H410 356 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 ZC4H2Q9NQZ6 224 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 TBC1D22BQ9NU19 505 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 TMEM260Q9NX78 707 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 ADA2Q9NZK5 511 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 MAD2L2Q9UI95 211 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 DRG1Q9Y295 367 aaKnown RBP9.29□□□□□ -0.92
PDGFC-201ENST00000274071 CNTNAP2Q9UHC6 1331 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 ROBO3Q96MS0 1386 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 FAM149AA5PLN7 773 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 TRPC5OSA6NMA1 111 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 C1QAP02745 245 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 RBP1P09455 135 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 ADORA2AP29274 412 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 NUMBP49757 651 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 ORC2Q13416 577 aaPredicted RBP9.29□□□□□ -0.92
PDGFC-201ENST00000274071 ZMYND11Q15326 602 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 TYSND1Q2T9J0 566 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 STYK1Q6J9G0 422 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 ERMP1Q7Z2K6 904 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 VN1R5Q7Z5H4 357 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 PCGF5Q86SE9 256 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 AADATQ8N5Z0 425 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 KAT5Q92993 513 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 DUS3LQ96G46 650 aaKnown RBP9.29□□□□□ -0.92
PDGFC-201ENST00000274071 RUSC1Q9BVN2 902 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 PCDH9Q9HC56 1237 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 SNX8Q9Y5X2 465 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 BRWD3Q6RI45 1802 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 MN1Q10571 1320 aaPredicted RBP9.28□□□□□ -0.92
PDGFC-201ENST00000274071 TMEM63AO94886 807 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 TSHRP16473 764 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 IL12AP29459 219 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 CAPGP40121 348 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 SERPINB10P48595 397 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 NPY2RP49146 381 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 MAPK12P53778 367 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 NLRP11P59045 1033 aaKnown RBP9.28□□□□□ -0.92
PDGFC-201ENST00000274071 GTF2IP78347 998 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 MGAT3Q09327 533 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 TOP3AQ13472 1001 aaPredicted RBP9.28□□□□□ -0.92
PDGFC-201ENST00000274071 ACAP2Q15057 778 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 PLA2G4FQ68DD2 849 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.28□□□□□ -0.92
PDGFC-201ENST00000274071 KCTD1Q719H9 257 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 PIGZQ86VD9 579 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 FBXO11Q86XK2 927 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 CCNYL1Q8N7R7 359 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 FAM71DQ8N9W8 422 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 URGCPQ8TCY9 931 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 TRPM4Q8TD43 1214 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 PHF10Q8WUB8 498 aaKnown RBP9.28□□□□□ -0.92
PDGFC-201ENST00000274071 INTS12Q96CB8 462 aaKnown RBP9.28□□□□□ -0.92
PDGFC-201ENST00000274071 MCRS1Q96EZ8 462 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 CNDP1Q96KN2 507 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 OPALINQ96PE5 141 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 TOR3AQ9H497 397 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 EFCAB1Q9HAE3 211 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 KLHL11Q9NVR0 708 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 TEKT2Q9UIF3 430 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 FBXO5Q9UKT4 447 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 DUOX1Q9NRD9 1551 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 YKT6O15498 198 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 SSX4O60224 188 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 HLA-DRAP01903 254 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 PRKCBP05771 671 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 BMP1P13497 986 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 ZNF250P15622 560 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 GTF2E2P29084 291 aaKnown RBP9.28□□□□□ -0.92
PDGFC-201ENST00000274071 ZNF76P36508 570 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 GARSP41250 739 aaKnown RBP9.28□□□□□ -0.92
PDGFC-201ENST00000274071 ABCE1P61221 599 aaKnown RBP9.28□□□□□ -0.92
PDGFC-201ENST00000274071 LSM3P62310 102 aaKnown RBP9.28□□□□□ -0.92
PDGFC-201ENST00000274071 MYL7Q01449 175 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 FSTL1Q12841 308 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 NFX1Q12986 1120 aaKnown RBP9.28□□□□□ -0.92
PDGFC-201ENST00000274071 SQLEQ14534 574 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 ATP13A4Q4VNC1 1196 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 TMEM65Q6PI78 240 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 KIAA1324Q6UXG2 1013 aaKnown RBP9.28□□□□□ -0.92
PDGFC-201ENST00000274071 LDHDQ86WU2 507 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 NLGN4XQ8N0W4 816 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 CARNMT1Q8N4J0 409 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 DHRSXQ8N5I4 330 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 OR4M1Q8NGD0 313 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 FANK1Q8TC84 345 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 CANT1Q8WVQ1 401 aa9.28□□□□□ -0.92
PDGFC-201ENST00000274071 PROX1Q92786 737 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms