RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 NXNL1Q96CM4 212 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 DMRTB1Q96MA1 342 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 INO80B-WBP1J3KQ70 363 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 M0R3G1 203 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 SNAP91O60641 907 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 HSPA8P11142 646 aaKnown RBP12.92□□□□□ -0.34
HERC6-202ENST00000273960 ITGB6P18564 788 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 SDC4P31431 198 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 GJA9P57773 515 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 AQP6Q13520 282 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 VGLL4Q14135 290 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 ARHGAP17Q68EM7 881 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 PPP4R4Q6NUP7 873 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 CDKL3Q8IVW4 592 aaPredicted RBP12.92□□□□□ -0.34
HERC6-202ENST00000273960 FSTL5Q8N475 847 aaPredicted RBP12.92□□□□□ -0.34
HERC6-202ENST00000273960 OR2T34Q8NGX1 318 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 OR2T3Q8NH03 318 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 FNIP1Q8TF40 1166 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 SH3YL1Q96HL8 342 aaPredicted RBP12.92□□□□□ -0.34
HERC6-202ENST00000273960 UNC93B1Q9H1C4 597 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 TNFRSF12AQ9NP84 129 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 KLHL8Q9P2G9 620 aaPredicted RBP12.92□□□□□ -0.34
HERC6-202ENST00000273960 TBC1D14Q9P2M4 693 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 ITGB1BP2Q9UKP3 347 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 ERVK-11Q9UQG0 969 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 UBIAD1Q9Y5Z9 338 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 COL11A2P13942 1736 aaPredicted RBP12.92□□□□□ -0.34
HERC6-202ENST00000273960 FSHRP23945 695 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 IST1P53990 364 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 NIPAL4Q0D2K0 466 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 IFRD2Q12894 506 aaPredicted RBP12.92□□□□□ -0.34
HERC6-202ENST00000273960 BCL2A1Q16548 175 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 DUOXA2Q1HG44 320 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 RSBN1Q5VWQ0 802 aaPredicted RBP12.92□□□□□ -0.34
HERC6-202ENST00000273960 ANKRD34AQ69YU3 496 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 TIFABQ6ZNK6 161 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 ADCK1Q86TW2 530 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 TMEM192Q8IY95 271 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 RYBPQ8N488 228 aaPredicted RBP12.92□□□□□ -0.34
HERC6-202ENST00000273960 ACMSDQ8TDX5 336 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 CLEC4CQ8WTT0 213 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 TRAPPC12Q8WVT3 735 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 ARNTL2Q8WYA1 636 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 ITCHQ96J02 903 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 MAGED4Q96JG8 741 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 RNF145Q96MT1 663 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 CNPY3Q9BT09 278 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 MTRRQ9UBK8 725 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 ALBP02768 609 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 BDNFP23560 247 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 APLP1P51693 650 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 NEK2P51955 445 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 VBP1P61758 197 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 SNRPFP62306 86 aaKnown RBP12.91□□□□□ -0.34
HERC6-202ENST00000273960 CCNA1P78396 465 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 PRKAA1Q13131 559 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 AMHR2Q16671 573 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 LY6KQ17RY6 165 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 C6orf10Q5SRN2 563 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 GJC2Q5T442 439 aaPredicted RBP12.91□□□□□ -0.34
HERC6-202ENST00000273960 FAM117BQ6P1L5 589 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 CNSTQ6PJW8 725 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 TBPL2Q6SJ96 375 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 APOBEC3FQ8IUX4 373 aaKnown RBP12.91□□□□□ -0.34
HERC6-202ENST00000273960 USP33Q8TEY7 942 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 HTR3CQ8WXA8 447 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 VPS39Q96JC1 886 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 BBS2Q9BXC9 721 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 FRMD8P1Q9BZ68 369 aaPredicted RBP12.91□□□□□ -0.34
HERC6-202ENST00000273960 ZNF302Q9NR11 478 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 OXSMQ9NWU1 459 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 DPP3Q9NY33 737 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 PSME2Q9UL46 239 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 TIMM22Q9Y584 194 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 CENPFP49454 3210 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 DLX3O60479 287 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 PSMA4P25789 261 aaKnown RBP12.91□□□□□ -0.34
HERC6-202ENST00000273960 CNTFP26441 200 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 ZNF132P52740 706 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 PLA2G16P53816 162 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 CDH13P55290 713 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 RPS3AP61247 264 aaKnown RBP12.91□□□□□ -0.34
HERC6-202ENST00000273960 STX5Q13190 355 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 ZNF667Q5HYK9 610 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 ATAD3BQ5T9A4 648 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 NEPROQ6NW34 567 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 ERMP1Q7Z2K6 904 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 VSIG10LQ86VR7 867 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 CCDC103Q8IW40 242 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 LRRC39Q96DD0 335 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 ZFYVE19Q96K21 471 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 POMKQ9H5K3 350 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 SEPT3Q9UH03 358 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 TCAF1Q9Y4C2 921 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 CDK5RAP2Q96SN8 1893 aa12.91□□□□□ -0.34
HERC6-202ENST00000273960 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.9□□□□□ -0.34
HERC6-202ENST00000273960 CCRL2O00421 344 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 HUS1O60921 280 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 BCAS1O75363 584 aaPredicted RBP12.9□□□□□ -0.34
HERC6-202ENST00000273960 PGAM1P18669 254 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms