RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 PACS1Q6VY07 963 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 DNAJB7Q7Z6W7 309 aaPredicted RBP13.8□□□□□ -0.2
NPC1-201ENST00000269228 CMC1Q7Z7K0 106 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 RBFAQ8N0V3 343 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 MREGQ8N565 214 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 IL1RAPL1Q9NZN1 696 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 PCDHGC4Q9Y5F7 938 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 TCHHQ07283 1943 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 MAGEC1O60732 1142 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 PTP4A2Q12974 167 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 GRM3Q14832 879 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 CA9Q16790 459 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 CRYBG2Q8N1P7 616 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 RTL3Q8N8U3 475 aaKnown RBP13.8□□□□□ -0.2
NPC1-201ENST00000269228 ACE2Q9BYF1 805 aaPredicted RBP13.8□□□□□ -0.2
NPC1-201ENST00000269228 MAGEH1Q9H213 219 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 CAB39LQ9H9S4 337 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 MAN1C1Q9NR34 630 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 SNX15Q9NRS6 342 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 FZD10Q9ULW2 581 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 VWA7Q9Y334 891 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 MYH13Q9UKX3 1938 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 QSOX1O00391 747 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 NDST3O95803 873 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 KCNE1P15382 129 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 OCA2Q04671 838 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 TBL3Q12788 808 aaKnown RBP13.8□□□□□ -0.2
NPC1-201ENST00000269228 TNS4Q8IZW8 715 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 C12orf50Q8NA57 414 aaPredicted RBP13.8□□□□□ -0.2
NPC1-201ENST00000269228 ATL1Q8WXF7 558 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 PLD4Q96BZ4 506 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 C9IYK1 514 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 FFAR3O14843 346 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 GPR42O15529 346 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 HCRTO43612 131 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 CFHP08603 1231 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 ALDH6A1Q02252 535 aaKnown RBP13.8□□□□□ -0.2
NPC1-201ENST00000269228 EML3Q32P44 896 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 INPP5DQ92835 1189 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 RPL10LQ96L21 214 aaKnown RBP13.8□□□□□ -0.2
NPC1-201ENST00000269228 TSC22D3Q99576 134 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 CHRAC1Q9NRG0 131 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 FCF1Q9Y324 198 aaKnown RBP13.8□□□□□ -0.2
NPC1-201ENST00000269228 YIPF1Q9Y548 306 aa13.8□□□□□ -0.2
NPC1-201ENST00000269228 C5orf60A6NFR6 353 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 PTPN4P29074 926 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 HOXD13P35453 343 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 PSMD8P48556 350 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 MAP3K10Q02779 954 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 SYT12Q8IV01 421 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 ZNF567Q8N184 647 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 B4GALNT2Q8NHY0 566 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 PCDH19Q8TAB3 1148 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 ZNF398Q8TD17 642 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 LRRC15Q8TF66 581 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 DNAJC9Q8WXX5 260 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 CPT1BQ92523 772 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 LRRC4CQ9HCJ2 640 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 XPR1Q9UBH6 696 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 C16orf96A6NNT2 1141 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 NUDT17P0C025 328 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 TPSB2P20231 275 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 MAPKAPK2P49137 400 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 SLC11A1P49279 550 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 PWP1Q13610 501 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 TPSAB1Q15661 275 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 PRR23CQ6ZRP0 262 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 BBS7Q8IWZ6 715 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 PLEKHO2Q8TD55 490 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 PSMG2Q969U7 264 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 BBS4Q96RK4 519 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 LAMB4A4D0S4 1761 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 CCDC154A6NI56 674 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 TULP2O00295 520 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 MAP2K7O14733 419 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 MRASO14807 208 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 ALBP02768 609 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 GRIA4P48058 902 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 TTC27Q6P3X3 843 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 SNX32Q86XE0 403 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 P3H2Q8IVL5 708 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 LINGO1Q96FE5 620 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 SLC9A7Q96T83 725 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 KCTD14Q9BQ13 255 aaPredicted RBP13.79□□□□□ -0.2
NPC1-201ENST00000269228 GBA3Q9H227 469 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 GKN1Q9NS71 199 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 MEI4A8MW99 385 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 MATN3O15232 486 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 ZW10O43264 779 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 CYP7B1O75881 506 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 APTXQ7Z2E3 356 aaKnown RBP13.79□□□□□ -0.2
NPC1-201ENST00000269228 ACMSDQ8TDX5 336 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 MRPL57Q9BQC6 102 aaKnown RBP13.79□□□□□ -0.2
NPC1-201ENST00000269228 RHBGQ9H310 441 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 CROTQ9UKG9 612 aa13.79□□□□□ -0.2
NPC1-201ENST00000269228 CACNB4O00305 520 aaPredicted RBP13.78□□□□□ -0.2
NPC1-201ENST00000269228 VPS4BO75351 444 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 RNASEH2AO75792 299 aaKnown RBP13.78□□□□□ -0.2
NPC1-201ENST00000269228 SLC35G4P0C7Q5 338 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 TRIM32Q13049 653 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms