RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 HPCAL1P37235 193 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 VBP1P61758 197 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 TGFB2P61812 414 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 RC3H1Q5TC82 1133 aaKnown RBP16.39■□□□□ 0.21
GPC1-201ENST00000264039 SH2D5Q6ZV89 423 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 PIGZQ86VD9 579 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 CENPNQ96H22 339 aaPredicted RBP16.39■□□□□ 0.21
GPC1-201ENST00000264039 RBBP8Q99708 897 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 OSBPL10Q9BXB5 764 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 ALG2Q9H553 416 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 GDAP2Q9NXN4 497 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.39■□□□□ 0.21
GPC1-201ENST00000264039 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.39■□□□□ 0.21
GPC1-201ENST00000264039 ZNF37AP17032 561 aaPredicted RBP16.39■□□□□ 0.21
GPC1-201ENST00000264039 SURF1Q15526 300 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 ATF7IP2Q5U623 682 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 ARHGAP36Q6ZRI8 547 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 GALNT5Q7Z7M9 940 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 RAB2BQ8WUD1 216 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 DHRS1Q96LJ7 313 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 ACO2Q99798 780 aaKnown RBP16.39■□□□□ 0.21
GPC1-201ENST00000264039 LIMD1Q9UGP4 676 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 TMX2Q9Y320 296 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 CACNA1SQ13698 1873 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 IL1BP01584 269 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 ICAM1P05362 532 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 KCNA2P16389 499 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 IST1P53990 364 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 VAC14Q08AM6 782 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 CCNYL2Q5T2Q4 361 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 ACVR1CQ8NER5 493 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 CDC26Q8NHZ8 85 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 MCFD2Q8NI22 146 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 ACDQ96AP0 544 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 ATG4CQ96DT6 458 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 ZNF597Q96LX8 424 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 CEP295NLQ96MC4 621 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 HBEGFQ99075 208 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 LPIN3Q9BQK8 851 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 C17orf80Q9BSJ5 609 aa16.39■□□□□ 0.21
GPC1-201ENST00000264039 MTF2Q9Y483 593 aaPredicted RBP16.39■□□□□ 0.21
GPC1-201ENST00000264039 SPATA31A5Q5VU36 1347 aa16.38■□□□□ 0.21
GPC1-201ENST00000264039 SPATA31A7Q8IWB4 1347 aa16.38■□□□□ 0.21
GPC1-201ENST00000264039 DHX15O43143 795 aaKnown RBP16.38■□□□□ 0.21
GPC1-201ENST00000264039 CYP7B1O75881 506 aa16.38■□□□□ 0.21
GPC1-201ENST00000264039 NFICP08651 508 aa16.38■□□□□ 0.21
GPC1-201ENST00000264039 STAT5BP51692 787 aa16.38■□□□□ 0.21
GPC1-201ENST00000264039 LIMK2P53671 638 aa16.38■□□□□ 0.21
GPC1-201ENST00000264039 SIM2Q14190 667 aaPredicted RBP16.38■□□□□ 0.21
GPC1-201ENST00000264039 MEP1AQ16819 746 aa16.38■□□□□ 0.21
GPC1-201ENST00000264039 INSCQ1MX18 579 aa16.38■□□□□ 0.21
GPC1-201ENST00000264039 RABL3Q5HYI8 236 aa16.38■□□□□ 0.21
GPC1-201ENST00000264039 ANKRD13AQ8IZ07 590 aa16.38■□□□□ 0.21
GPC1-201ENST00000264039 FBXL18Q96ME1 805 aa16.38■□□□□ 0.21
GPC1-201ENST00000264039 OXSMQ9NWU1 459 aa16.38■□□□□ 0.21
GPC1-201ENST00000264039 PADI4Q9UM07 663 aa16.38■□□□□ 0.21
GPC1-201ENST00000264039 PCP4L1A6NKN8 68 aa16.38■□□□□ 0.21
GPC1-201ENST00000264039 H2AFYO75367 372 aaKnown RBP16.38■□□□□ 0.21
GPC1-201ENST00000264039 LINC00032P0C843 101 aa16.38■□□□□ 0.21
GPC1-201ENST00000264039 MZF1P28698 734 aaPredicted RBP16.38■□□□□ 0.21
GPC1-201ENST00000264039 FAM214AQ32MH5 1076 aa16.38■□□□□ 0.21
GPC1-201ENST00000264039 COLEC12Q5KU26 742 aa16.38■□□□□ 0.21
GPC1-201ENST00000264039 CUZD1Q86UP6 607 aa16.38■□□□□ 0.21
GPC1-201ENST00000264039 CADM3Q8N126 398 aa16.38■□□□□ 0.21
GPC1-201ENST00000264039 DEPDC4Q8N2C3 294 aa16.38■□□□□ 0.21
GPC1-201ENST00000264039 UBE2J2Q8N2K1 259 aa16.38■□□□□ 0.21
GPC1-201ENST00000264039 UBASH3BQ8TF42 649 aa16.38■□□□□ 0.21
GPC1-201ENST00000264039 CENPOQ9BU64 300 aa16.38■□□□□ 0.21
GPC1-201ENST00000264039 RIBC2Q9H4K1 309 aa16.38■□□□□ 0.21
GPC1-201ENST00000264039 PNPLA8Q9NP80 782 aa16.38■□□□□ 0.21
GPC1-201ENST00000264039 TMEM98Q9Y2Y6 226 aa16.38■□□□□ 0.21
GPC1-201ENST00000264039 B4GALT5O43286 388 aa16.37■□□□□ 0.21
GPC1-201ENST00000264039 MFSD11O43934 449 aa16.37■□□□□ 0.21
GPC1-201ENST00000264039 IFI30P13284 250 aa16.37■□□□□ 0.21
GPC1-201ENST00000264039 HGFP14210 728 aa16.37■□□□□ 0.21
GPC1-201ENST00000264039 ALDH3B2P48448 385 aa16.37■□□□□ 0.21
GPC1-201ENST00000264039 CYP4F2P78329 520 aa16.37■□□□□ 0.21
GPC1-201ENST00000264039 TXNL4AP83876 142 aaKnown RBP16.37■□□□□ 0.21
GPC1-201ENST00000264039 CYP4F3Q08477 520 aa16.37■□□□□ 0.21
GPC1-201ENST00000264039 SPANXN3Q5MJ09 141 aa16.37■□□□□ 0.21
GPC1-201ENST00000264039 PPP2R2DQ66LE6 453 aa16.37■□□□□ 0.21
GPC1-201ENST00000264039 R3HCC1LQ7Z5L2 792 aaKnown RBP16.37■□□□□ 0.21
GPC1-201ENST00000264039 LDB1Q86U70 411 aaPredicted RBP16.37■□□□□ 0.21
GPC1-201ENST00000264039 OR52K2Q8NGK3 314 aa16.37■□□□□ 0.21
GPC1-201ENST00000264039 SLC7A14Q8TBB6 771 aa16.37■□□□□ 0.21
GPC1-201ENST00000264039 GIPC2Q8TF65 315 aa16.37■□□□□ 0.21
GPC1-201ENST00000264039 SLC35B4Q969S0 331 aa16.37■□□□□ 0.21
GPC1-201ENST00000264039 ZHX1-C8orf76Q96EF9 292 aa16.37■□□□□ 0.21
GPC1-201ENST00000264039 TEX13BQ9BXU2 312 aa16.37■□□□□ 0.21
GPC1-201ENST00000264039 WDR12Q9GZL7 423 aaKnown RBP16.37■□□□□ 0.21
GPC1-201ENST00000264039 TRMT13Q9NUP7 481 aaKnown RBP16.37■□□□□ 0.21
GPC1-201ENST00000264039 MAGED1Q9Y5V3 778 aaPredicted RBP16.37■□□□□ 0.21
GPC1-201ENST00000264039 TCAF2A6NFQ2 919 aa16.37■□□□□ 0.21
GPC1-201ENST00000264039 DLX3O60479 287 aa16.37■□□□□ 0.21
GPC1-201ENST00000264039 FADS2O95864 444 aaKnown RBP16.37■□□□□ 0.21
GPC1-201ENST00000264039 ASNSP08243 561 aa16.37■□□□□ 0.21
GPC1-201ENST00000264039 TXNP10599 105 aaKnown RBP16.37■□□□□ 0.21
GPC1-201ENST00000264039 IDO1P14902 403 aa16.37■□□□□ 0.21
GPC1-201ENST00000264039 CXCR3P49682 368 aa16.37■□□□□ 0.21
GPC1-201ENST00000264039 AP3M2P53677 418 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms