RNA–Protein interactions for RNA: ENST00000262829.11

RBFOX2-201, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-201ENST00000262829 LRRN4Q8WUT4 740 aa14.7□□□□□ -0.06
RBFOX2-201ENST00000262829 RAB7BQ96AH8 199 aa14.7□□□□□ -0.06
RBFOX2-201ENST00000262829 CINPQ9BW66 212 aaPredicted RBP14.7□□□□□ -0.06
RBFOX2-201ENST00000262829 SUV39H2Q9H5I1 410 aa14.7□□□□□ -0.06
RBFOX2-201ENST00000262829 PCDH18Q9HCL0 1135 aa14.7□□□□□ -0.06
RBFOX2-201ENST00000262829 PCDH12Q9NPG4 1184 aa14.7□□□□□ -0.06
RBFOX2-201ENST00000262829 IP6K2Q9UHH9 426 aa14.7□□□□□ -0.06
RBFOX2-201ENST00000262829 LRRK1Q38SD2 2015 aa14.7□□□□□ -0.06
RBFOX2-201ENST00000262829 NBEAQ8NFP9 2946 aa14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 SHROOM3Q8TF72 1996 aa14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 ANKRD36A6QL64 1941 aa14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 PKD1L2Q7Z442 2459 aa14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 FPGTO14772 594 aa14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 SCAMP1O15126 338 aa14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 YKT6O15498 198 aa14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 MAP3K6O95382 1288 aa14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 IGFALSP35858 605 aa14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 ARL4AP40617 200 aa14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 HCAR3P49019 387 aa14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 SCNN1BP51168 640 aa14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 PIGHQ14442 188 aaPredicted RBP14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 DPYSL2Q16555 572 aa14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 FAM182AQ5T1J6 154 aa14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 TMPRSS7Q7RTY8 843 aa14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 OXR1Q8N573 874 aa14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 PAF1Q8N7H5 531 aa14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 KDF1Q8NAX2 398 aaPredicted RBP14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 ZNF564Q8TBZ8 553 aaPredicted RBP14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 CXorf40AQ8TE69 158 aa14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 CENPTQ96BT3 561 aa14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 CPEB1Q9BZB8 566 aaKnown RBP14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 TCEAL2Q9H3H9 227 aaPredicted RBP14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 CTTNBP2NLQ9P2B4 639 aa14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 PNMA8BQ9ULN7 279 aaPredicted RBP14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 NENFQ9UMX5 172 aa14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 HS3ST3A1Q9Y663 406 aa14.69□□□□□ -0.06
RBFOX2-201ENST00000262829 EIF3CLB5ME19 914 aaKnown RBP14.68□□□□□ -0.06
RBFOX2-201ENST00000262829 TAF4O00268 1085 aa14.68□□□□□ -0.06
RBFOX2-201ENST00000262829 ACADVLP49748 655 aa14.68□□□□□ -0.06
RBFOX2-201ENST00000262829 CDH6P55285 790 aa14.68□□□□□ -0.06
RBFOX2-201ENST00000262829 KRT81Q14533 505 aa14.68□□□□□ -0.06
RBFOX2-201ENST00000262829 UGP2Q16851 508 aa14.68□□□□□ -0.06
RBFOX2-201ENST00000262829 BOLA3Q53S33 107 aa14.68□□□□□ -0.06
RBFOX2-201ENST00000262829 CFAP58Q5T655 872 aa14.68□□□□□ -0.06
RBFOX2-201ENST00000262829 SPECC1LQ69YQ0 1117 aa14.68□□□□□ -0.06
RBFOX2-201ENST00000262829 TMCO3Q6UWJ1 677 aa14.68□□□□□ -0.06
RBFOX2-201ENST00000262829 KYAT3Q6YP21 454 aaKnown RBP14.68□□□□□ -0.06
RBFOX2-201ENST00000262829 PSTKQ8IV42 348 aaKnown RBP14.68□□□□□ -0.06
RBFOX2-201ENST00000262829 RBFAQ8N0V3 343 aa14.68□□□□□ -0.06
RBFOX2-201ENST00000262829 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.68□□□□□ -0.06
RBFOX2-201ENST00000262829 EIF3CQ99613 913 aaKnown RBP14.68□□□□□ -0.06
RBFOX2-201ENST00000262829 CHP1Q99653 195 aa14.68□□□□□ -0.06
RBFOX2-201ENST00000262829 SPTLC3Q9NUV7 552 aa14.68□□□□□ -0.06
RBFOX2-201ENST00000262829 DKK3Q9UBP4 350 aa14.68□□□□□ -0.06
RBFOX2-201ENST00000262829 COL5A1P20908 1838 aaPredicted RBP14.68□□□□□ -0.06
RBFOX2-201ENST00000262829 SPTY2D1-AS1A0A0U1RR47 76 aa14.67□□□□□ -0.06
RBFOX2-201ENST00000262829 MYO1FO00160 1098 aa14.67□□□□□ -0.06
RBFOX2-201ENST00000262829 PIAS2O75928 621 aa14.67□□□□□ -0.06
RBFOX2-201ENST00000262829 TM7SF2O76062 418 aa14.67□□□□□ -0.06
RBFOX2-201ENST00000262829 TPM3P06753 285 aa14.67□□□□□ -0.06
RBFOX2-201ENST00000262829 GIMD1P0DJR0 217 aa14.67□□□□□ -0.06
RBFOX2-201ENST00000262829 IL4RP24394 825 aa14.67□□□□□ -0.06
RBFOX2-201ENST00000262829 TAS2R40P59535 323 aa14.67□□□□□ -0.06
RBFOX2-201ENST00000262829 MAXP61244 160 aa14.67□□□□□ -0.06
RBFOX2-201ENST00000262829 IL10RBQ08334 325 aa14.67□□□□□ -0.06
RBFOX2-201ENST00000262829 C1orf61Q13536 156 aa14.67□□□□□ -0.06
RBFOX2-201ENST00000262829 LBRQ14739 615 aaKnown RBP14.67□□□□□ -0.06
RBFOX2-201ENST00000262829 PTPRRQ15256 657 aa14.67□□□□□ -0.06
RBFOX2-201ENST00000262829 IRF4Q15306 451 aa14.67□□□□□ -0.06
RBFOX2-201ENST00000262829 VSTM4Q8IW00 320 aa14.67□□□□□ -0.06
RBFOX2-201ENST00000262829 PGBD5Q8N414 524 aa14.67□□□□□ -0.06
RBFOX2-201ENST00000262829 NIPA2Q8N8Q9 360 aa14.67□□□□□ -0.06
RBFOX2-201ENST00000262829 OR8K1Q8NGG5 319 aa14.67□□□□□ -0.06
RBFOX2-201ENST00000262829 TSC1Q92574 1164 aa14.67□□□□□ -0.06
RBFOX2-201ENST00000262829 LENG8Q96PV6 779 aaPredicted RBP14.67□□□□□ -0.06
RBFOX2-201ENST00000262829 DNAJC7Q99615 494 aa14.67□□□□□ -0.06
RBFOX2-201ENST00000262829 DONSONQ9NYP3 566 aa14.67□□□□□ -0.06
RBFOX2-201ENST00000262829 ZFYVE26Q68DK2 2539 aa14.67□□□□□ -0.06
RBFOX2-201ENST00000262829 KNTC1P50748 2209 aa14.67□□□□□ -0.06
RBFOX2-201ENST00000262829 APC2O95996 2303 aa14.67□□□□□ -0.06
RBFOX2-201ENST00000262829 ITPR1Q14643 2758 aa14.67□□□□□ -0.06
RBFOX2-201ENST00000262829 SRRM3A6NNA2 597 aaPredicted RBP14.66□□□□□ -0.06
RBFOX2-201ENST00000262829 RFPL3O75679 317 aa14.66□□□□□ -0.06
RBFOX2-201ENST00000262829 PEX11BO96011 259 aa14.66□□□□□ -0.06
RBFOX2-201ENST00000262829 C6P13671 934 aa14.66□□□□□ -0.06
RBFOX2-201ENST00000262829 HNRNPH3P31942 346 aaKnown RBP14.66□□□□□ -0.06
RBFOX2-201ENST00000262829 RABIFP47224 123 aa14.66□□□□□ -0.06
RBFOX2-201ENST00000262829 LIG3P49916 1009 aa14.66□□□□□ -0.06
RBFOX2-201ENST00000262829 EIF2B5Q13144 721 aaKnown RBP14.66□□□□□ -0.06
RBFOX2-201ENST00000262829 ACAP1Q15027 740 aa14.66□□□□□ -0.06
RBFOX2-201ENST00000262829 SMAD1Q15797 465 aaKnown RBP14.66□□□□□ -0.06
RBFOX2-201ENST00000262829 PROX2Q3B8N5 592 aa14.66□□□□□ -0.06
RBFOX2-201ENST00000262829 TP53I13Q8NBR0 393 aaPredicted RBP14.66□□□□□ -0.06
RBFOX2-201ENST00000262829 PDCD6IPQ8WUM4 868 aaKnown RBP14.66□□□□□ -0.06
RBFOX2-201ENST00000262829 IQCDQ96DY2 449 aa14.66□□□□□ -0.06
RBFOX2-201ENST00000262829 KRTAP3-3Q9BYR6 98 aa14.66□□□□□ -0.06
RBFOX2-201ENST00000262829 KRTAP3-2Q9BYR7 98 aa14.66□□□□□ -0.06
RBFOX2-201ENST00000262829 DEF6Q9H4E7 631 aa14.66□□□□□ -0.06
RBFOX2-201ENST00000262829 ATP13A3Q9H7F0 1226 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms