RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 TMCO5AQ8N6Q1 288 aa11.59□□□□□ -0.55
TROAP-201ENST00000257909 MAGED4Q96JG8 741 aa11.59□□□□□ -0.55
TROAP-201ENST00000257909 PGLYRP2Q96PD5 576 aa11.59□□□□□ -0.55
TROAP-201ENST00000257909 ALPK1Q96QP1 1244 aa11.59□□□□□ -0.55
TROAP-201ENST00000257909 HOPXQ9BPY8 73 aaPredicted RBP11.59□□□□□ -0.55
TROAP-201ENST00000257909 MRPL46Q9H2W6 279 aaKnown RBP11.59□□□□□ -0.55
TROAP-201ENST00000257909 RAD21L1Q9H4I0 556 aa11.59□□□□□ -0.55
TROAP-201ENST00000257909 IFT80Q9P2H3 777 aaPredicted RBP11.59□□□□□ -0.55
TROAP-201ENST00000257909 ACOX3O15254 700 aa11.59□□□□□ -0.55
TROAP-201ENST00000257909 GAS2O43903 313 aaKnown RBP11.59□□□□□ -0.55
TROAP-201ENST00000257909 CLIC3O95833 236 aa11.59□□□□□ -0.55
TROAP-201ENST00000257909 HDCP19113 662 aa11.59□□□□□ -0.55
TROAP-201ENST00000257909 ATP4BP51164 291 aa11.59□□□□□ -0.55
TROAP-201ENST00000257909 ATXN1P54253 815 aaKnown RBP11.59□□□□□ -0.55
TROAP-201ENST00000257909 UGP2Q16851 508 aa11.59□□□□□ -0.55
TROAP-201ENST00000257909 CYBRD1Q53TN4 286 aa11.59□□□□□ -0.55
TROAP-201ENST00000257909 ZNF618Q5T7W0 954 aa11.59□□□□□ -0.55
TROAP-201ENST00000257909 THOC7Q6I9Y2 204 aaKnown RBP11.59□□□□□ -0.55
TROAP-201ENST00000257909 USP51Q70EK9 711 aa11.59□□□□□ -0.55
TROAP-201ENST00000257909 OFCC1Q8IZS5 231 aa11.59□□□□□ -0.55
TROAP-201ENST00000257909 TTC30BQ8N4P2 665 aa11.59□□□□□ -0.55
TROAP-201ENST00000257909 CCDC185Q8N715 623 aa11.59□□□□□ -0.55
TROAP-201ENST00000257909 SLC35F5Q8WV83 523 aa11.59□□□□□ -0.55
TROAP-201ENST00000257909 MYRFLQ96LU7 910 aa11.59□□□□□ -0.55
TROAP-201ENST00000257909 GLT1D1Q96MS3 346 aa11.59□□□□□ -0.55
TROAP-201ENST00000257909 PRDM12Q9H4Q4 367 aa11.59□□□□□ -0.55
TROAP-201ENST00000257909 HMG20AQ9NP66 347 aa11.59□□□□□ -0.55
TROAP-201ENST00000257909 ACTR3BQ9P1U1 418 aa11.59□□□□□ -0.55
TROAP-201ENST00000257909 KLHL8Q9P2G9 620 aaPredicted RBP11.59□□□□□ -0.55
TROAP-201ENST00000257909 ABCD2Q9UBJ2 740 aa11.59□□□□□ -0.55
TROAP-201ENST00000257909 LCTP09848 1927 aa11.59□□□□□ -0.55
TROAP-201ENST00000257909 FAM149AA5PLN7 773 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 H0YAE9 185 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 EI24O14681 340 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 PFDN6O15212 129 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 GPIP06744 558 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 MYL3P08590 195 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 PABPC1P11940 636 aaKnown RBP11.58□□□□□ -0.56
TROAP-201ENST00000257909 HSD17B1P14061 328 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 ATP5F1P24539 256 aaPredicted RBP11.58□□□□□ -0.56
TROAP-201ENST00000257909 ICAM3P32942 547 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 RPS9P46781 194 aaKnown RBP11.58□□□□□ -0.56
TROAP-201ENST00000257909 OCA2Q04671 838 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 TNK2Q07912 1038 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 TSTD2Q5T7W7 516 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 PPP1R26Q5T8A7 1209 aaPredicted RBP11.58□□□□□ -0.56
TROAP-201ENST00000257909 BROXQ5VW32 411 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 JADE1Q6IE81 842 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 CNSTQ6PJW8 725 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 FAM83AQ86UY5 434 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 DDIASQ8IXT1 998 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 CMTR2Q8IYT2 770 aaKnown RBP11.58□□□□□ -0.56
TROAP-201ENST00000257909 SFRP1Q8N474 314 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 C12orf29Q8N999 325 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 SNX31Q8N9S9 440 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 LEMD2Q8NC56 503 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 TRPV3Q8NET8 790 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 FAM110BQ8TC76 370 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 WNK4Q96J92 1243 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 MRPL57Q9BQC6 102 aaKnown RBP11.58□□□□□ -0.56
TROAP-201ENST00000257909 WDR12Q9GZL7 423 aaKnown RBP11.58□□□□□ -0.56
TROAP-201ENST00000257909 FAM49BQ9NUQ9 324 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 LACTBL1A8MY62 500 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 NRP1O14786 923 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 USP12O75317 370 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 CYP2C8P10632 490 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 CHRNA5P30532 468 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 SCNN1AP37088 669 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 AVPR1AP37288 418 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 RAB10P61026 200 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 STX1BP61266 288 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 OLIG2Q13516 323 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 SPATS1Q496A3 300 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 FAM160B1Q5W0V3 765 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 STYK1Q6J9G0 422 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 NEPROQ6NW34 567 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 STRADAQ7RTN6 431 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 SPPL2CQ8IUH8 684 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 NLGN1Q8N2Q7 840 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 HDAC10Q969S8 669 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 CCDC126Q96EE4 140 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 SH3YL1Q96HL8 342 aaPredicted RBP11.58□□□□□ -0.56
TROAP-201ENST00000257909 HGH1Q9BTY7 390 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 BEGAINQ9BUH8 593 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 B3GNT5Q9BYG0 378 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 CDT1Q9H211 546 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 POMKQ9H5K3 350 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 RPAP3Q9H6T3 665 aaPredicted RBP11.58□□□□□ -0.56
TROAP-201ENST00000257909 FANCEQ9HB96 536 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 FZD10Q9ULW2 581 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 SCAF8Q9UPN6 1271 aaKnown RBP11.58□□□□□ -0.56
TROAP-201ENST00000257909 FIS1Q9Y3D6 152 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 SRCAPQ6ZRS2 3230 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 RLFQ13129 1914 aa11.58□□□□□ -0.56
TROAP-201ENST00000257909 TTC24A2A3L6 582 aaPredicted RBP11.57□□□□□ -0.56
TROAP-201ENST00000257909 AP3B1O00203 1094 aa11.57□□□□□ -0.56
TROAP-201ENST00000257909 SPTLC1O15269 473 aa11.57□□□□□ -0.56
TROAP-201ENST00000257909 STMN1P16949 149 aa11.57□□□□□ -0.56
TROAP-201ENST00000257909 EEF1B2P24534 225 aaKnown RBP11.57□□□□□ -0.56
TROAP-201ENST00000257909 EEF1DP29692 281 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms