RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 CDX2Q99626 313 aaPredicted RBP18.88■□□□□ 0.61
TNFSF9-201ENST00000245817 UGT1A7Q9HAW7 530 aa18.88■□□□□ 0.61
TNFSF9-201ENST00000245817 UGT1A10Q9HAW8 530 aa18.88■□□□□ 0.61
TNFSF9-201ENST00000245817 UGT1A8Q9HAW9 530 aa18.88■□□□□ 0.61
TNFSF9-201ENST00000245817 TRPV4Q9HBA0 871 aa18.88■□□□□ 0.61
TNFSF9-201ENST00000245817 IARS2Q9NSE4 1012 aaKnown RBP18.88■□□□□ 0.61
TNFSF9-201ENST00000245817 ATG2AQ2TAZ0 1938 aa18.87■□□□□ 0.61
TNFSF9-201ENST00000245817 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.87■□□□□ 0.61
TNFSF9-201ENST00000245817 SMAD6O43541 496 aaKnown RBP18.87■□□□□ 0.61
TNFSF9-201ENST00000245817 VAPBO95292 243 aa18.87■□□□□ 0.61
TNFSF9-201ENST00000245817 PAPSS2O95340 614 aaPredicted RBP18.87■□□□□ 0.61
TNFSF9-201ENST00000245817 CYP17A1P05093 508 aa18.87■□□□□ 0.61
TNFSF9-201ENST00000245817 CREB1P16220 341 aa18.87■□□□□ 0.61
TNFSF9-201ENST00000245817 CSNK1DP48730 415 aa18.87■□□□□ 0.61
TNFSF9-201ENST00000245817 EPHB1P54762 984 aa18.87■□□□□ 0.61
TNFSF9-201ENST00000245817 SNRPD1P62314 119 aaKnown RBP18.87■□□□□ 0.61
TNFSF9-201ENST00000245817 ECT2LQ008S8 904 aa18.87■□□□□ 0.61
TNFSF9-201ENST00000245817 CNGA3Q16281 694 aa18.87■□□□□ 0.61
TNFSF9-201ENST00000245817 TSTD2Q5T7W7 516 aa18.87■□□□□ 0.61
TNFSF9-201ENST00000245817 TEDDM1Q5T9Z0 273 aa18.87■□□□□ 0.61
TNFSF9-201ENST00000245817 TRIM68Q6AZZ1 485 aa18.87■□□□□ 0.61
TNFSF9-201ENST00000245817 PACS1Q6VY07 963 aa18.87■□□□□ 0.61
TNFSF9-201ENST00000245817 C4orf33Q8N1A6 199 aa18.87■□□□□ 0.61
TNFSF9-201ENST00000245817 RYBPQ8N488 228 aaPredicted RBP18.87■□□□□ 0.61
TNFSF9-201ENST00000245817 ANKRD42Q8N9B4 389 aa18.87■□□□□ 0.61
TNFSF9-201ENST00000245817 LPCAT1Q8NF37 534 aa18.87■□□□□ 0.61
TNFSF9-201ENST00000245817 BRSK1Q8TDC3 778 aa18.87■□□□□ 0.61
TNFSF9-201ENST00000245817 RSPRY1Q96DX4 576 aa18.87■□□□□ 0.61
TNFSF9-201ENST00000245817 RIPOR3Q96MK2 946 aa18.87■□□□□ 0.61
TNFSF9-201ENST00000245817 TRIB3Q96RU7 358 aa18.87■□□□□ 0.61
TNFSF9-201ENST00000245817 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.87■□□□□ 0.611e-6■■□□□ 13
TNFSF9-201ENST00000245817 HS3ST2Q9Y278 367 aa18.87■□□□□ 0.61
TNFSF9-201ENST00000245817 FAM47DPA6NHR8 397 aa18.86■□□□□ 0.61
TNFSF9-201ENST00000245817 CRTAMO95727 393 aa18.86■□□□□ 0.61
TNFSF9-201ENST00000245817 SPRP35270 261 aaPredicted RBP18.86■□□□□ 0.61
TNFSF9-201ENST00000245817 NNMTP40261 264 aa18.86■□□□□ 0.61
TNFSF9-201ENST00000245817 DGKGP49619 791 aa18.86■□□□□ 0.61
TNFSF9-201ENST00000245817 BCL2L1Q07817 233 aa18.86■□□□□ 0.61
TNFSF9-201ENST00000245817 SEPT7Q16181 437 aaKnown RBP18.86■□□□□ 0.61
TNFSF9-201ENST00000245817 MROH9Q5TGP6 573 aa18.86■□□□□ 0.61
TNFSF9-201ENST00000245817 MBLAC2Q68D91 279 aa18.86■□□□□ 0.61
TNFSF9-201ENST00000245817 ASTLQ6HA08 431 aaPredicted RBP18.86■□□□□ 0.61
TNFSF9-201ENST00000245817 KIAA0930Q6ICG6 404 aaPredicted RBP18.86■□□□□ 0.61
TNFSF9-201ENST00000245817 STRA8Q7Z7C7 330 aa18.86■□□□□ 0.61
TNFSF9-201ENST00000245817 YAF2Q8IY57 180 aa18.86■□□□□ 0.61
TNFSF9-201ENST00000245817 DYDC1Q8WWB3 177 aa18.86■□□□□ 0.61
TNFSF9-201ENST00000245817 ISG20Q96AZ6 181 aaKnown RBP18.86■□□□□ 0.61
TNFSF9-201ENST00000245817 SSU72Q9NP77 194 aaKnown RBP18.86■□□□□ 0.61
TNFSF9-201ENST00000245817 TREX1Q9NSU2 369 aa18.86■□□□□ 0.61
TNFSF9-201ENST00000245817 CDH22Q9UJ99 828 aa18.86■□□□□ 0.61
TNFSF9-201ENST00000245817 SLC8A2Q9UPR5 921 aa18.86■□□□□ 0.61
TNFSF9-201ENST00000245817 HOXC11O43248 304 aaPredicted RBP18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 SPAG7O75391 227 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 SRCP12931 536 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 CTSOP43234 321 aaPredicted RBP18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 DNAJC3Q13217 504 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 PDGFRLQ15198 375 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 ARMC12Q5T9G4 340 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 OR2AP1Q8NGE2 309 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 CALML6Q8TD86 181 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 MGARPQ8TDB4 240 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 MZB1Q8WU39 189 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 MYLIPQ8WY64 445 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 CENPTQ96BT3 561 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 FAM167BQ9BTA0 163 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 CEP44Q9C0F1 390 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 SLC2A6Q9UGQ3 507 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 EVLQ9UI08 416 aaPredicted RBP18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 MROH6A6NGR9 719 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 PRPF4O43172 522 aaKnown RBP eCLIP18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 STK19P49842 368 aaPredicted RBP18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 PRAMEP78395 509 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 PDE1BQ01064 536 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 RAD51Q06609 339 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 TRAF2Q12933 501 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 MSLNQ13421 630 aaPredicted RBP18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 BMPR2Q13873 1038 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 UGP2Q16851 508 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 TAX1BP1Q86VP1 789 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 WFIKKN2Q8TEU8 576 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 PTPRN2Q92932 1015 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 PEX13Q92968 403 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 GUCD1Q96NT3 240 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 AGAP2Q99490 1192 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 TNKS2Q9H2K2 1166 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 EBF3Q9H4W6 596 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 ATP13A3Q9H7F0 1226 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 CLDND1Q9NY35 253 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 SLC17A6Q9P2U8 582 aa18.85■□□□□ 0.61
TNFSF9-201ENST00000245817 C2orf81A6NN90 581 aa18.84■□□□□ 0.61
TNFSF9-201ENST00000245817 ANKRD66B4E2M5 251 aa18.84■□□□□ 0.61
TNFSF9-201ENST00000245817 GOLGA8TH3BQL2 631 aa18.84■□□□□ 0.61
TNFSF9-201ENST00000245817 GOLGA8RI6L899 631 aa18.84■□□□□ 0.61
TNFSF9-201ENST00000245817 BNIP3LO60238 219 aa18.84■□□□□ 0.61
TNFSF9-201ENST00000245817 SHOX2O60902 331 aaPredicted RBP18.84■□□□□ 0.61
TNFSF9-201ENST00000245817 ATP5BP06576 529 aaKnown RBP18.84■□□□□ 0.61
TNFSF9-201ENST00000245817 ARSAP15289 507 aa18.84■□□□□ 0.61
TNFSF9-201ENST00000245817 CSE1LP55060 971 aaKnown RBP18.84■□□□□ 0.61
TNFSF9-201ENST00000245817 DGKKQ5KSL6 1271 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms