RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 ARMC4Q5T2S8 1044 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 TMC8Q8IU68 726 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 RNF145Q96MT1 663 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 REXO4Q9GZR2 422 aaKnown RBP7.39□□□□□ -1.23
SSR1-201ENST00000244763 RERGLQ9H628 205 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 DDX4Q9NQI0 724 aaKnown RBP7.39□□□□□ -1.23
SSR1-201ENST00000244763 C3orf18Q9UK00 162 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 DUSP10Q9Y6W6 482 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 EML1O00423 815 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 MAGEB3O15480 346 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 MMP3P08254 477 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 RARAP10276 462 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 VARSP26640 1264 aaKnown RBP7.39□□□□□ -1.23
SSR1-201ENST00000244763 RPL14P50914 215 aaKnown RBP7.39□□□□□ -1.23
SSR1-201ENST00000244763 SPANXN2Q5MJ10 180 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 ZNF662Q6ZS27 426 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 EFCAB3Q8N7B9 438 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 OR4L1Q8NH43 312 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 CYP2W1Q8TAV3 490 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 NELL1Q92832 810 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 LMAN2LQ9H0V9 348 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 ZFYVE1Q9HBF4 777 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 DDX3XO00571 662 aaKnown RBP eCLIP7.39□□□□□ -1.235e-15■■□□□ 11.6
SSR1-201ENST00000244763 CLDN4O14493 209 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 IFNGP01579 166 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 PSMB9P28065 219 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 PSMB4P28070 264 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 PFKFB4Q16877 469 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 XKR6Q5GH73 641 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 LLGL2Q6P1M3 1020 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 TMC3Q7Z5M5 1100 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 PROSER1Q86XN7 944 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 C12orf50Q8NA57 414 aaPredicted RBP7.39□□□□□ -1.23
SSR1-201ENST00000244763 TMEM161BQ8NDZ6 487 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 PIWIL2Q8TC59 973 aaKnown RBP7.39□□□□□ -1.23
SSR1-201ENST00000244763 FEM1CQ96JP0 617 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 CLIC5Q9NZA1 410 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 PCDHA2Q9Y5H9 948 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 TBC1D3DA0A087WVF3 549 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 TBC1D3IA0A087WXS9 549 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 TBC1D3EA0A087X179 549 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 TBC1D3KA0A087X1G2 549 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 TBC1D3FA6NER0 549 aaPredicted RBP7.39□□□□□ -1.23
SSR1-201ENST00000244763 BTNL10A8MVZ5 291 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 TBC1D3LB9A6J9 549 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 VIPP01282 170 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 TBC1D3HP0C7X1 549 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 LRPAP1P30533 357 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 SQLEQ14534 574 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 TBC1D3GQ6DHY5 549 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 TBC1D3CQ6IPX1 549 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 LRRC74BQ6ZQY2 392 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 FAM183BPQ6ZVS7 135 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 TBC1D3Q8IZP1 549 aaPredicted RBP7.39□□□□□ -1.23
SSR1-201ENST00000244763 RTL3Q8N8U3 475 aaKnown RBP7.39□□□□□ -1.23
SSR1-201ENST00000244763 RHBGQ9H310 441 aa7.39□□□□□ -1.23
SSR1-201ENST00000244763 DISP2A7MBM2 1401 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 GSAPA4D1B5 854 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 GLTPD2A6NH11 291 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 B4GALT4O60513 344 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 ABHD2P08910 425 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 RPL21P46778 160 aaKnown RBP7.38□□□□□ -1.23
SSR1-201ENST00000244763 SCTRP47872 440 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 GPR158Q5T848 1215 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 ARMC3Q5W041 872 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 C9orf57Q5W0N0 161 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 ZNF671Q8TAW3 534 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 EPS8L1Q8TE68 723 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 TM6SF2Q9BZW4 377 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 TMCC2O75069 709 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 OR1D2P34982 312 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 ASMTP46597 345 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 CXCR3P49682 368 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 ATP12AP54707 1039 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 TARBP2Q15633 366 aaKnown RBP7.38□□□□□ -1.23
SSR1-201ENST00000244763 TTC27Q6P3X3 843 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 C3orf67Q6ZVT6 689 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 GPR180Q86V85 440 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 GJD3Q8N144 294 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 DNAJC18Q9H819 358 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 KPNA4O00629 521 aaPredicted RBP7.38□□□□□ -1.23
SSR1-201ENST00000244763 ATG13O75143 517 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 UBTFL6P0CB48 400 aaPredicted RBP7.38□□□□□ -1.23
SSR1-201ENST00000244763 CDK18Q07002 472 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 TBC1D25Q3MII6 688 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 GPRIN3Q6ZVF9 776 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 IZUMO1Q8IYV9 350 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 MTFMTQ96DP5 389 aaKnown RBP7.38□□□□□ -1.23
SSR1-201ENST00000244763 SNRNP25Q9BV90 132 aaKnown RBP7.38□□□□□ -1.23
SSR1-201ENST00000244763 MTRRQ9UBK8 725 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 CCNYL3P0C7X3 344 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 PECAM1P16284 738 aaPredicted RBP7.38□□□□□ -1.23
SSR1-201ENST00000244763 CASP7P55210 303 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 CDC42P60953 191 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 ENPEPQ07075 957 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 CAPSQ13938 189 aa7.38□□□□□ -1.23
SSR1-201ENST00000244763 MARK2Q7KZI7 788 aaKnown RBP7.38□□□□□ -1.23
SSR1-201ENST00000244763 PHF10Q8WUB8 498 aaKnown RBP7.38□□□□□ -1.23
SSR1-201ENST00000244763 ZNF75CPQ92670 426 aaPredicted RBP7.38□□□□□ -1.23
SSR1-201ENST00000244763 KLRG1Q96E93 195 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms