RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 WDR60Q8WVS4 1066 aa12.82□□□□□ -0.36
SNAI1-201ENST00000244050 STON2Q8WXE9 905 aa12.82□□□□□ -0.36
SNAI1-201ENST00000244050 TSNARE1Q96NA8 513 aa12.82□□□□□ -0.36
SNAI1-201ENST00000244050 ZNF570Q96NI8 536 aa12.82□□□□□ -0.36
SNAI1-201ENST00000244050 GATA5Q9BWX5 397 aaPredicted RBP12.82□□□□□ -0.36
SNAI1-201ENST00000244050 ACE2Q9BYF1 805 aaPredicted RBP12.82□□□□□ -0.36
SNAI1-201ENST00000244050 NOL6Q9H6R4 1146 aaKnown RBP12.82□□□□□ -0.36
SNAI1-201ENST00000244050 MPP6Q9NZW5 540 aa12.82□□□□□ -0.36
SNAI1-201ENST00000244050 AFF4Q9UHB7 1163 aaKnown RBP12.82□□□□□ -0.36
SNAI1-201ENST00000244050 IGLV3-10A0A075B6K4 115 aa12.81□□□□□ -0.36
SNAI1-201ENST00000244050 GOLGA8TH3BQL2 631 aa12.81□□□□□ -0.36
SNAI1-201ENST00000244050 RFXAPO00287 272 aa12.81□□□□□ -0.36
SNAI1-201ENST00000244050 NCOR1O75376 2440 aa12.81□□□□□ -0.36
SNAI1-201ENST00000244050 VAPBO95292 243 aa12.81□□□□□ -0.36
SNAI1-201ENST00000244050 PSMG1O95456 288 aa12.81□□□□□ -0.36
SNAI1-201ENST00000244050 HSPA4LO95757 839 aa12.81□□□□□ -0.36
SNAI1-201ENST00000244050 F7P08709 466 aaPredicted RBP12.81□□□□□ -0.36
SNAI1-201ENST00000244050 SBK3P0C264 359 aa12.81□□□□□ -0.36
SNAI1-201ENST00000244050 PRDX6P30041 224 aa12.81□□□□□ -0.36
SNAI1-201ENST00000244050 PPM1AP35813 382 aa12.81□□□□□ -0.36
SNAI1-201ENST00000244050 CPOXP36551 454 aa12.81□□□□□ -0.36
SNAI1-201ENST00000244050 PTDSS1P48651 473 aaKnown RBP12.81□□□□□ -0.36
SNAI1-201ENST00000244050 RENBPP51606 427 aa12.81□□□□□ -0.36
SNAI1-201ENST00000244050 TNK2Q07912 1038 aa12.81□□□□□ -0.36
SNAI1-201ENST00000244050 ACBD5Q5T8D3 534 aaPredicted RBP12.81□□□□□ -0.36
SNAI1-201ENST00000244050 TPGS2Q68CL5 300 aa12.81□□□□□ -0.36
SNAI1-201ENST00000244050 KDELC1Q6UW63 502 aa12.81□□□□□ -0.36
SNAI1-201ENST00000244050 RAPH1Q70E73 1250 aa12.81□□□□□ -0.36
SNAI1-201ENST00000244050 C2CD4AQ8NCU7 369 aaPredicted RBP12.81□□□□□ -0.36
SNAI1-201ENST00000244050 KCNV2Q8TDN2 545 aa12.81□□□□□ -0.36
SNAI1-201ENST00000244050 STYXQ8WUJ0 223 aa12.81□□□□□ -0.36
SNAI1-201ENST00000244050 CEP295NLQ96MC4 621 aa12.81□□□□□ -0.36
SNAI1-201ENST00000244050 RANBP9Q96S59 729 aa12.81□□□□□ -0.36
SNAI1-201ENST00000244050 FSD1LQ9BXM9 530 aa12.81□□□□□ -0.36
SNAI1-201ENST00000244050 ATP13A1Q9HD20 1204 aa12.81□□□□□ -0.36
SNAI1-201ENST00000244050 VPS45Q9NRW7 570 aa12.81□□□□□ -0.36
SNAI1-201ENST00000244050 TMEM248Q9NWD8 314 aa12.81□□□□□ -0.36
SNAI1-201ENST00000244050 MARCH2Q9P0N8 246 aa12.81□□□□□ -0.36
SNAI1-201ENST00000244050 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.81□□□□□ -0.36
SNAI1-201ENST00000244050 STX18Q9P2W9 335 aaKnown RBP12.81□□□□□ -0.36
SNAI1-201ENST00000244050 ACOT9Q9Y305 439 aa12.81□□□□□ -0.36
SNAI1-201ENST00000244050 EPOPA6NHQ4 379 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 TARM1B6A8C7 271 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 H0Y3Z8 333 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 PMPCBO75439 489 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 NEBLO76041 1014 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 SEC24AO95486 1093 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 TBX18O95935 607 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 SLC35E2BP0CK96 405 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 COL9A1P20849 921 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 CRABP2P29373 138 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 NUMBP49757 651 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 WNT3AP56704 352 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 RAB10P61026 200 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 TRMT5Q32P41 509 aaKnown RBP12.8□□□□□ -0.36
SNAI1-201ENST00000244050 LIPMQ5VYY2 423 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 KIAA0408Q6ZU52 694 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 ULK2Q8IYT8 1036 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.8□□□□□ -0.36
SNAI1-201ENST00000244050 ZNF781Q8N8C0 355 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 ATP6V0D2Q8N8Y2 350 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 N4BP2L2Q92802 583 aaPredicted RBP12.8□□□□□ -0.36
SNAI1-201ENST00000244050 CMTM5Q96DZ9 223 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 IMP4Q96G21 291 aaKnown RBP12.8□□□□□ -0.36
SNAI1-201ENST00000244050 FAM167BQ9BTA0 163 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 ZYG11BQ9C0D3 744 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 DRC3Q9H069 523 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 ILKAPQ9H0C8 392 aaPredicted RBP12.8□□□□□ -0.36
SNAI1-201ENST00000244050 TASP1Q9H6P5 420 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 COG4Q9H9E3 785 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 CYP4F11Q9HBI6 524 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 BATF3Q9NR55 127 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 HSFX1Q9UBD0 423 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 RAPGEFL1Q9UHV5 662 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 RAP2CQ9Y3L5 183 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.8□□□□□ -0.36
SNAI1-201ENST00000244050 SLC12A8A0AV02 714 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 CCDC78A2IDD5 438 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 TLR5O60602 858 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 CIB2O75838 187 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 ABLIM3O94929 683 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 CA3P07451 260 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 BMP1P13497 986 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 POU3F3P20264 500 aaPredicted RBP12.8□□□□□ -0.36
SNAI1-201ENST00000244050 CA8P35219 290 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 ALDH1A3P47895 512 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 COPAP53621 1224 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 TFF2Q03403 129 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 SLC34A1Q06495 639 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 THOC5Q13769 683 aaKnown RBP12.8□□□□□ -0.36
SNAI1-201ENST00000244050 RCN1Q15293 331 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 TAF11Q15544 211 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 TRIP4Q15650 581 aaPredicted RBP12.8□□□□□ -0.36
SNAI1-201ENST00000244050 CNGA3Q16281 694 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 TAF12Q16514 161 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 FSCBQ5H9T9 825 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 MS4A13Q5J8X5 152 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 C6orf163Q5TEZ5 329 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 SLC41A1Q8IVJ1 513 aa12.8□□□□□ -0.36
SNAI1-201ENST00000244050 DENND6AQ8IWF6 608 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms