RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 ATP7AQ04656 1500 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 SRRM3A6NNA2 597 aaPredicted RBP11.18□□□□□ -0.62
MSH6-201ENST00000234420 CASKO14936 926 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 CPNE3O75131 537 aaKnown RBP11.18□□□□□ -0.62
MSH6-201ENST00000234420 AZGP1P25311 298 aaKnown RBP11.18□□□□□ -0.62
MSH6-201ENST00000234420 RPL4P36578 427 aaKnown RBP11.18□□□□□ -0.62
MSH6-201ENST00000234420 NECTIN1Q15223 517 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 LPAL2Q16609 132 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 MINDY4Q4G0A6 757 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 CXXC5Q7LFL8 322 aaKnown RBP11.18□□□□□ -0.62
MSH6-201ENST00000234420 AMIGO2Q86SJ2 522 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 HELQQ8TDG4 1101 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 USP20Q9Y2K6 914 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 RHPN2P1A8MT19 583 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 MAGEA6P43360 314 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 N4BP2L1Q5TBK1 243 aaPredicted RBP11.18□□□□□ -0.62
MSH6-201ENST00000234420 SDHAF4Q5VUM1 108 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 ARMC8Q8IUR7 673 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 SEMA4AQ9H3S1 761 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 EQTNQ9NQ60 294 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 TMLHEQ9NVH6 421 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 AP4E1Q9UPM8 1137 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 RAD54BQ9Y620 910 aa11.18□□□□□ -0.62
MSH6-201ENST00000234420 ABCC10Q5T3U5 1492 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 H7C2Y5 167 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 TRMUO75648 421 aaKnown RBP11.17□□□□□ -0.62
MSH6-201ENST00000234420 CYP4B1P13584 511 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 CLCN2P51788 898 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 CRELD2Q6UXH1 353 aaPredicted RBP11.17□□□□□ -0.62
MSH6-201ENST00000234420 TBC1D10CQ8IV04 446 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 OR6K2Q8NGY2 324 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 TRAPPC12Q8WVT3 735 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 TREM1Q9NP99 234 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 VPS4AQ9UN37 437 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 HIF3AQ9Y2N7 669 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 FLT1P17948 1338 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 G3V2T6 193 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 NOL4O94818 638 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 FSHRP23945 695 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 NAMPTP43490 491 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 ARSHQ5FYA8 562 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 ZNF621Q6ZSS3 439 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 ACTRT2Q8TDY3 377 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 CLCC1Q96S66 551 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 CATSPERZQ9NTU4 200 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 DMGDHQ9UI17 866 aaKnown RBP11.17□□□□□ -0.62
MSH6-201ENST00000234420 CRYL1Q9Y2S2 319 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 E7ENX8 843 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 ULK1O75385 1050 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 CBX5P45973 191 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 BNIP1Q12981 228 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 GRIK4Q16099 956 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 XKR3Q5GH77 459 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 MOB2Q70IA6 237 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 OFCC1Q8IZS5 231 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 EIF1ADQ8N9N8 165 aaKnown RBP11.17□□□□□ -0.62
MSH6-201ENST00000234420 ANKZF1Q9H8Y5 726 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 FADS2O95864 444 aaKnown RBP11.17□□□□□ -0.62
MSH6-201ENST00000234420 DBIP07108 87 aaKnown RBP11.17□□□□□ -0.62
MSH6-201ENST00000234420 GLI1P08151 1106 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 HOXB7P09629 217 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 ADCYAP1R1P41586 468 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 CDC42P60953 191 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 RPL6Q02878 288 aaKnown RBP11.17□□□□□ -0.62
MSH6-201ENST00000234420 PUS10Q3MIT2 529 aaKnown RBP11.17□□□□□ -0.62
MSH6-201ENST00000234420 OVOS1Q6IE37 1185 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 OR10Q1Q8NGQ4 319 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 DLG3Q92796 817 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 L2HGDHQ9H9P8 463 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 DCP1AQ9NPI6 582 aaPredicted RBP11.17□□□□□ -0.62
MSH6-201ENST00000234420 THAP1Q9NVV9 213 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 ADIGQ0VDE8 80 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 ABRQ12979 859 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 SEMA3AQ14563 771 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 SWT1Q5T5J6 900 aaKnown RBP11.17□□□□□ -0.62
MSH6-201ENST00000234420 GJB7Q6PEY0 223 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 CRTC1Q6UUV9 634 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 ZNF677Q86XU0 584 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 GATAD2BQ8WXI9 593 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 FDXACB1Q9BRP7 624 aaPredicted RBP11.17□□□□□ -0.62
MSH6-201ENST00000234420 GPATCH1Q9BRR8 931 aaKnown RBP11.17□□□□□ -0.62
MSH6-201ENST00000234420 A1CFQ9NQ94 594 aaKnown RBP11.17□□□□□ -0.62
MSH6-201ENST00000234420 ZNF225Q9UK10 706 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 PCDHGA6Q9Y5G7 932 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 PLXNC1O60486 1568 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 TMEM265A0A087WTH1 108 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 RNASEH2AO75792 299 aaKnown RBP11.17□□□□□ -0.62
MSH6-201ENST00000234420 ACADSBP45954 432 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 FMO5P49326 533 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 MAPK12P53778 367 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 ZNF234Q14588 700 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 HKDC1Q2TB90 917 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 SPESP1Q6UW49 350 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 CHERPQ8IWX8 916 aaKnown RBP11.17□□□□□ -0.62
MSH6-201ENST00000234420 SPERTQ8NA61 448 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 CHCHD6Q9BRQ6 235 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 C3orf18Q9UK00 162 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 GIT1Q9Y2X7 761 aa11.17□□□□□ -0.62
MSH6-201ENST00000234420 HYKKA2RU49 373 aa11.16□□□□□ -0.62
MSH6-201ENST00000234420 PRKD3O94806 890 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms