RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 HM13Q8TCT9 377 aa14.27□□□□□ -0.13
PCDHB3-201ENST00000231130 NIFKQ9BYG3 293 aaKnown RBP14.27□□□□□ -0.13
PCDHB3-201ENST00000231130 PTPRHQ9HD43 1115 aa14.27□□□□□ -0.13
PCDHB3-201ENST00000231130 FBXO9Q9UK97 447 aaPredicted RBP14.27□□□□□ -0.13
PCDHB3-201ENST00000231130 GPSM3Q9Y4H4 160 aa14.27□□□□□ -0.13
PCDHB3-201ENST00000231130 N6AMT1Q9Y5N5 214 aa14.27□□□□□ -0.13
PCDHB3-201ENST00000231130 BMP10O95393 424 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 PGK2P07205 417 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 MAGEA6P43360 314 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 PRKAA1Q13131 559 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 MXD4Q14582 209 aaPredicted RBP14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 POU6F1Q14863 301 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 SLC10A6Q3KNW5 377 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 STXBP5Q5T5C0 1151 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 UBE2UQ5VVX9 321 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 LIPMQ5VYY2 423 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 FRA10AC1Q70Z53 315 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 TRUB1Q8WWH5 349 aaKnown RBP14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 CNDP1Q96KN2 507 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 OLFM1Q99784 485 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 FTHL17Q9BXU8 183 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 SLC2A11Q9BYW1 496 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 ACOT8O14734 319 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 OPRL1P41146 370 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 CASP2P42575 452 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 BAG6P46379 1132 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 CLK3P49761 638 aaKnown RBP14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 SLC7A2P52569 658 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 MRPS15P82914 257 aaKnown RBP14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 MPP1Q00013 466 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 WDR45BQ5MNZ6 344 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 TICAM1Q8IUC6 712 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 ZCCHC7Q8N3Z6 543 aaKnown RBP14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 ZNF280CQ8ND82 737 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 ACDQ96AP0 544 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 COQ7Q99807 217 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 ADNPQ9H2P0 1102 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 FBRSL1Q9HCM7 1045 aaKnown RBP14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 DNAH12Q6ZR08 3092 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 HEATR9A2RTY3 570 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 CCRL2O00421 344 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 MDM4O15151 490 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 DLX3O60479 287 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 COPZ1P61923 177 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 LSM3P62310 102 aaKnown RBP14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 CLCQ05315 142 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 E2F2Q14209 437 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 FASTKQ14296 549 aaKnown RBP14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 TARBP2Q15633 366 aaKnown RBP14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 GJC2Q5T442 439 aaPredicted RBP14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 AHDC1Q5TGY3 1603 aaPredicted RBP14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 STEAP4Q687X5 459 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 DCLRE1AQ6PJP8 1040 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 CTU1Q7Z7A3 348 aaKnown RBP14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 PARP8Q8N3A8 854 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 CELF6Q96J87 481 aaKnown RBP14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 TRIM39Q9HCM9 518 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 GIMAP4Q9NUV9 329 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 GIMAP2Q9UG22 337 aa14.26□□□□□ -0.13
PCDHB3-201ENST00000231130 KDM4FA0A1W2PPD8 638 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 CCDC162PA2VCL2 907 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 ZBTB24O43167 697 aaPredicted RBP14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 CHRNB1P11230 501 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 TXNL4AP83876 142 aaKnown RBP14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 DPYSL2Q16555 572 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 USP41Q3LFD5 358 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 CHSY3Q70JA7 882 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 C11orf74Q86VG3 221 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 DLG3Q92796 817 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 FBXL20Q96IG2 436 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 CTRCQ99895 268 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 NPLQ9BXD5 320 aaPredicted RBP14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 DGCR6LQ9BY27 220 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 PLEKHA5Q9HAU0 1116 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 MYOZ2Q9NPC6 264 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 PTPRFP10586 1907 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 C9IYK1 514 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 M0QYT0 321 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 TNFRSF10AO00220 468 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 APBA3O96018 575 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 YWHAQP27348 245 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 NR2C2P49116 596 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 IST1P53990 364 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 GJA9P57773 515 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 CSHL1Q14406 222 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 KIF19Q2TAC6 998 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 CLEC6AQ6EIG7 209 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 RFPL4BQ6ZWI9 263 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 CARM1Q86X55 608 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 RNF139Q8WU17 664 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 R3HDMLQ9H3Y0 253 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 RAD21L1Q9H4I0 556 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 KLQ9UEF7 1012 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 KLHL3Q9UH77 587 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 CNOT6Q9ULM6 557 aaKnown RBP14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 SNX10Q9Y5X0 201 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 QSER1Q2KHR3 1735 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 DLGAP3O95886 979 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 HPCAL1P37235 193 aa14.25□□□□□ -0.13
PCDHB3-201ENST00000231130 RPS3AP61247 264 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms