RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 GRIA4P48058 902 aa13.86□□□□□ -0.19
VEGFA-201ENST00000230480 SCNN1BP51168 640 aa13.86□□□□□ -0.19
VEGFA-201ENST00000230480 PPIDQ08752 370 aaKnown RBP13.86□□□□□ -0.19
VEGFA-201ENST00000230480 HNRNPDQ14103 355 aaKnown RBP13.86□□□□□ -0.19
VEGFA-201ENST00000230480 UGP2Q16851 508 aa13.86□□□□□ -0.19
VEGFA-201ENST00000230480 TMEM52BQ4KMG9 183 aa13.86□□□□□ -0.19
VEGFA-201ENST00000230480 GCNT7Q6ZNI0 430 aa13.86□□□□□ -0.19
VEGFA-201ENST00000230480 KANSL1Q7Z3B3 1105 aa13.86□□□□□ -0.19
VEGFA-201ENST00000230480 MAP7D3Q8IWC1 876 aa13.86□□□□□ -0.19
VEGFA-201ENST00000230480 MINDY1Q8N5J2 469 aa13.86□□□□□ -0.19
VEGFA-201ENST00000230480 HCAR2Q8TDS4 363 aa13.86□□□□□ -0.19
VEGFA-201ENST00000230480 SNX19Q92543 992 aa13.86□□□□□ -0.19
VEGFA-201ENST00000230480 CENPTQ96BT3 561 aa13.86□□□□□ -0.19
VEGFA-201ENST00000230480 HDAC11Q96DB2 347 aa13.86□□□□□ -0.19
VEGFA-201ENST00000230480 NUDCD1Q96RS6 583 aa13.86□□□□□ -0.19
VEGFA-201ENST00000230480 OSBPL1AQ9BXW6 950 aa13.86□□□□□ -0.19
VEGFA-201ENST00000230480 PNMA8BQ9ULN7 279 aaPredicted RBP13.86□□□□□ -0.19
VEGFA-201ENST00000230480 ANKRD6Q9Y2G4 727 aa13.86□□□□□ -0.19
VEGFA-201ENST00000230480 PCDHGC4Q9Y5F7 938 aa13.86□□□□□ -0.19
VEGFA-201ENST00000230480 POM121BA6NF01 834 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 KCNK1O00180 336 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 RIOK3O14730 519 aaKnown RBP13.85□□□□□ -0.19
VEGFA-201ENST00000230480 GIPC1O14908 333 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 SLC31A1O15431 190 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 SPOPO43791 374 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 FOXD2O60548 495 aaPredicted RBP13.85□□□□□ -0.19
VEGFA-201ENST00000230480 PAK4O96013 591 aaPredicted RBP13.85□□□□□ -0.19
VEGFA-201ENST00000230480 PYGMP11217 842 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 SERPINB6P35237 376 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 CLDN2P57739 230 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 FAM193AP78312 1265 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 DSC2Q02487 901 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 SFSWAPQ12872 951 aaKnown RBP13.85□□□□□ -0.19
VEGFA-201ENST00000230480 IFI16Q16666 785 aaKnown RBP13.85□□□□□ -0.19
VEGFA-201ENST00000230480 ZNF423Q2M1K9 1284 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 HLA-BQ31612 363 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 NAPEPLDQ6IQ20 393 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 FBXL19Q6PCT2 694 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 DAAM2Q86T65 1068 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 TTC7BQ86TV6 843 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 LRRC49Q8IUZ0 686 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 SLC22A18ASQ8N1D0 253 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 PELI3Q8N2H9 469 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 ATPAF2Q8N5M1 289 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 EXD1Q8NHP7 514 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 PIH1D2Q8WWB5 315 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 TADA1Q96BN2 335 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 SERAC1Q96JX3 654 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 PDLIM2Q96JY6 352 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 ZNF641Q96N77 438 aaPredicted RBP13.85□□□□□ -0.19
VEGFA-201ENST00000230480 TUBGCP5Q96RT8 1024 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 CINPQ9BW66 212 aaPredicted RBP13.85□□□□□ -0.19
VEGFA-201ENST00000230480 NUSAP1Q9BXS6 441 aaKnown RBP13.85□□□□□ -0.19
VEGFA-201ENST00000230480 SLC17A9Q9BYT1 436 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 C10orf88Q9H8K7 445 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 NT5MQ9NPB1 228 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 PCDH12Q9NPG4 1184 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 TMEM9BQ9NQ34 198 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 MBNL1Q9NR56 388 aaKnown RBP13.85□□□□□ -0.19
VEGFA-201ENST00000230480 DDX56Q9NY93 547 aaKnown RBP13.85□□□□□ -0.19
VEGFA-201ENST00000230480 SUSD2Q9UGT4 822 aa13.85□□□□□ -0.19
VEGFA-201ENST00000230480 PACSIN2Q9UNF0 486 aaPredicted RBP13.85□□□□□ -0.19
VEGFA-201ENST00000230480 LRP4O75096 1905 aa13.84□□□□□ -0.19
VEGFA-201ENST00000230480 MACROD2A1Z1Q3 448 aa13.84□□□□□ -0.19
VEGFA-201ENST00000230480 APOL1O14791 398 aa13.84□□□□□ -0.19
VEGFA-201ENST00000230480 CST8O60676 142 aa13.84□□□□□ -0.19
VEGFA-201ENST00000230480 MMP20O60882 483 aa13.84□□□□□ -0.19
VEGFA-201ENST00000230480 MMP12P39900 470 aa13.84□□□□□ -0.19
VEGFA-201ENST00000230480 MMP13P45452 471 aa13.84□□□□□ -0.19
VEGFA-201ENST00000230480 AFF3P51826 1226 aaKnown RBP13.84□□□□□ -0.19
VEGFA-201ENST00000230480 GSDMDP57764 484 aa13.84□□□□□ -0.19
VEGFA-201ENST00000230480 NXPH1P58417 271 aa13.84□□□□□ -0.19
VEGFA-201ENST00000230480 DYNLT1P63172 113 aa13.84□□□□□ -0.19
VEGFA-201ENST00000230480 IFI35P80217 286 aaPredicted RBP13.84□□□□□ -0.19
VEGFA-201ENST00000230480 WASHC5Q12768 1159 aa13.84□□□□□ -0.19
VEGFA-201ENST00000230480 PRKD1Q15139 912 aaPredicted RBP13.84□□□□□ -0.19
VEGFA-201ENST00000230480 MARC1Q5VT66 337 aa13.84□□□□□ -0.19
VEGFA-201ENST00000230480 ABI3BPQ7Z7G0 1075 aa13.84□□□□□ -0.19
VEGFA-201ENST00000230480 PRPF39Q86UA1 669 aaKnown RBP13.84□□□□□ -0.19
VEGFA-201ENST00000230480 RCOR2Q8IZ40 523 aa13.84□□□□□ -0.19
VEGFA-201ENST00000230480 MFSD2AQ8NA29 543 aa13.84□□□□□ -0.19
VEGFA-201ENST00000230480 KIAA1524Q8TCG1 905 aa13.84□□□□□ -0.19
VEGFA-201ENST00000230480 ASB12Q8WXK4 309 aa13.84□□□□□ -0.19
VEGFA-201ENST00000230480 RAB7BQ96AH8 199 aa13.84□□□□□ -0.19
VEGFA-201ENST00000230480 SEMA3CQ99985 751 aa13.84□□□□□ -0.19
VEGFA-201ENST00000230480 RTKNQ9BST9 563 aa13.84□□□□□ -0.19
VEGFA-201ENST00000230480 GTPBP2Q9BX10 602 aaKnown RBP13.84□□□□□ -0.19
VEGFA-201ENST00000230480 RBM22Q9NW64 420 aaKnown RBP eCLIP13.84□□□□□ -0.194e-11■■■■□ 26.1
VEGFA-201ENST00000230480 CDV3Q9UKY7 258 aaKnown RBP13.84□□□□□ -0.19
VEGFA-201ENST00000230480 DMTF1Q9Y222 760 aa13.84□□□□□ -0.19
VEGFA-201ENST00000230480 PPIL1Q9Y3C6 166 aa13.84□□□□□ -0.19
VEGFA-201ENST00000230480 HEY1Q9Y5J3 304 aa13.84□□□□□ -0.19
VEGFA-201ENST00000230480 ASXL3Q9C0F0 2248 aa13.84□□□□□ -0.19
VEGFA-201ENST00000230480 SPEGQ15772 3267 aa13.84□□□□□ -0.19
VEGFA-201ENST00000230480 TPRP12270 2363 aaKnown RBP13.83□□□□□ -0.19
VEGFA-201ENST00000230480 TCRBV7S2A1N4TA0A589 114 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 UPK3BL1B0FP48 263 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 UPK3BL2E5RIL1 263 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 DYNC1I1O14576 645 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 TSPAN6O43657 245 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms