RNA–Protein interactions for RNA: ENST00000229304.4

APOBEC1-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-201ENST00000229304 ITIH4Q14624 930 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 POU6F1Q14863 301 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 PCSK7Q16549 785 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 SIRPB2Q5JXA9 342 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 TSTD2Q5T7W7 516 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 GPR158Q5T848 1215 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 ESRP1Q6NXG1 681 aaKnown RBP9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 C6orf89Q6UWU4 347 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 CDHR3Q6ZTQ4 885 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 YTHDF3Q7Z739 585 aaKnown RBP9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 LCA5Q86VQ0 697 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 TRIM42Q8IWZ5 723 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 BBS7Q8IWZ6 715 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 CACNA2D3Q8IZS8 1091 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 CMTM8Q8IZV2 173 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 NDUFAF2Q8N183 169 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 CARNMT1Q8N4J0 409 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 ZNF557Q8N988 423 aaPredicted RBP9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 TDRD5Q8NAT2 981 aaKnown RBP9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 CCDC197Q8NCU1 140 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 FIBINQ8TAL6 211 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 RAB3IL1Q8TBN0 382 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 CALML6Q8TD86 181 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 BRSK1Q8TDC3 778 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 LRRC8CQ8TDW0 803 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 MICAL1Q8TDZ2 1067 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 SCG3Q8WXD2 468 aaKnown RBP9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 ZNF75CPQ92670 426 aaPredicted RBP9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 ATP2A3Q93084 1043 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 ACDQ96AP0 544 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 IFT43Q96FT9 208 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 ZNF778Q96MU6 729 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 PLCD4Q9BRC7 762 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 FEM1AQ9BSK4 669 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 FAM107BQ9H098 131 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 MUC3BQ9H195 1237 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 RHOJQ9H4E5 214 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 KIAA1522Q9P206 1035 aaPredicted RBP9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 SLC17A7Q9P2U7 560 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 SLC17A6Q9P2U8 582 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 GRID1Q9ULK0 1009 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 STARD13Q9Y3M8 1113 aa9.62□□□□□ -0.87
APOBEC1-201ENST00000229304 CBX4O00257 560 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 ZNF197O14709 1029 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 TPP1O14773 563 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 TMCC1O94876 653 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 ARHGEF15O94989 841 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 CYBBP04839 570 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 GLDCP23378 1020 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 MZF1P28698 734 aaPredicted RBP9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 WEE1P30291 646 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 CSKP41240 450 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 MAPK8P45983 427 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 SERPINB4P48594 390 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 CSNK1DP48730 415 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 PDE1BQ01064 536 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 THOC5Q13769 683 aaKnown RBP9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 CNGA3Q16281 694 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 FSCBQ5H9T9 825 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 PRSS36Q5K4E3 855 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 FSTL4Q6MZW2 842 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 RETSATQ6NUM9 610 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 NEPROQ6NW34 567 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 NCEH1Q6PIU2 408 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 ZC3HC1Q86WB0 502 aaKnown RBP9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 MFN1Q8IWA4 741 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 SLC25A41Q8N5S1 370 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 ANKS4BQ8N8V4 417 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 C2CD4AQ8NCU7 369 aaPredicted RBP9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 SNIP1Q8TAD8 396 aaKnown RBP9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 SH3RF2Q8TEC5 729 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 HLA-CQ95604 372 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 LMLNQ96KR4 655 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 FAM111AQ96PZ2 611 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 AGAP2Q99490 1192 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 GPR22Q99680 433 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 PAIP2Q9BPZ3 127 aaKnown RBP9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 C2orf49Q9BVC5 232 aaPredicted RBP9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 TDRD1Q9BXT4 1180 aaKnown RBP9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 IQCGQ9H095 443 aaKnown RBP9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 LMAN2LQ9H0V9 348 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 MFSD1Q9H3U5 465 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 NOD2Q9HC29 1040 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 IARS2Q9NSE4 1012 aaKnown RBP9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 PCMTD2Q9NV79 361 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 FGFR1OP2Q9NVK5 253 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 SIRPGQ9P1W8 387 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 SLC2A6Q9UGQ3 507 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 VPS51Q9UID3 782 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 VPS28Q9UK41 221 aa9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 ZNF638Q14966 1978 aaKnown RBP9.61□□□□□ -0.87
APOBEC1-201ENST00000229304 LDB2O43679 373 aa9.6□□□□□ -0.87
APOBEC1-201ENST00000229304 SNAP91O60641 907 aa9.6□□□□□ -0.87
APOBEC1-201ENST00000229304 EDF1O60869 148 aaKnown RBP9.6□□□□□ -0.87
APOBEC1-201ENST00000229304 RFPL2O75678 378 aa9.6□□□□□ -0.87
APOBEC1-201ENST00000229304 VAPBO95292 243 aa9.6□□□□□ -0.87
APOBEC1-201ENST00000229304 PENKP01210 267 aaPredicted RBP9.6□□□□□ -0.87
APOBEC1-201ENST00000229304 EPCAMP16422 314 aa9.6□□□□□ -0.87
APOBEC1-201ENST00000229304 GJA1P17302 382 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms