RNA–Protein interactions for RNA: ENST00000226328.8

RUFY3-201, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 4,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-201ENST00000226328 SAR1BQ9Y6B6 198 aa5.34□□□□□ -1.56
RUFY3-201ENST00000226328 KCNK1O00180 336 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 MATN3O15232 486 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 PPFIA2O75334 1257 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 LRCH4O75427 683 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 ITGB7P26010 798 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 PHBP35232 272 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 GARSP41250 739 aaKnown RBP5.33□□□□□ -1.56
RUFY3-201ENST00000226328 STK19P49842 368 aaPredicted RBP5.33□□□□□ -1.56
RUFY3-201ENST00000226328 TPMTP51580 245 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 CCR5P51681 352 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 HDAC4P56524 1084 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 TUBB4BP68371 445 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 ILF2Q12905 390 aaKnown RBP5.33□□□□□ -1.56
RUFY3-201ENST00000226328 CCINQ13939 588 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 DPYSL2Q16555 572 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 ALS2CLQ60I27 953 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 MRNIPQ6NTE8 343 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 UMODL1-AS1Q8N2C9 162 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 UBR7Q8N806 425 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.33□□□□□ -1.56
RUFY3-201ENST00000226328 BRSK1Q8TDC3 778 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 TTC17Q96AE7 1141 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 NUS1Q96E22 293 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 BTBD6Q96KE9 485 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 SLC38A3Q99624 504 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.33□□□□□ -1.56
RUFY3-201ENST00000226328 FANCEQ9HB96 536 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 PCDH9Q9HC56 1237 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 PRSS16Q9NQE7 514 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 FBXO9Q9UK97 447 aaPredicted RBP5.33□□□□□ -1.56
RUFY3-201ENST00000226328 RIF1Q5UIP0 2472 aaKnown RBP5.33□□□□□ -1.56
RUFY3-201ENST00000226328 UBA6A0AVT1 1052 aaPredicted RBP5.33□□□□□ -1.56
RUFY3-201ENST00000226328 GOLGA6L10A6NI86 522 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 SMAPO00193 183 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 SLC25A14O95258 325 aaPredicted RBP5.33□□□□□ -1.56
RUFY3-201ENST00000226328 VIPP01282 170 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 KLKB1P03952 638 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 SRCP12931 536 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 JUNDP17535 347 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 NDUFV2P19404 249 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 HNRNPH3P31942 346 aaKnown RBP5.33□□□□□ -1.56
RUFY3-201ENST00000226328 VIPR1P32241 457 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 RGS4P49798 205 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 PLK1P53350 603 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 SIM1P81133 766 aaPredicted RBP5.33□□□□□ -1.56
RUFY3-201ENST00000226328 MPP3Q13368 585 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 SERINC3Q13530 473 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 C10orf62Q5T681 223 aaPredicted RBP5.33□□□□□ -1.56
RUFY3-201ENST00000226328 ATXN7L2Q5T6C5 722 aaPredicted RBP5.33□□□□□ -1.56
RUFY3-201ENST00000226328 MARK2Q7KZI7 788 aaKnown RBP5.33□□□□□ -1.56
RUFY3-201ENST00000226328 CEP112Q8N8E3 955 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 IGSF8Q969P0 613 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 ZNF514Q96K75 400 aaPredicted RBP5.33□□□□□ -1.56
RUFY3-201ENST00000226328 NUDCD1Q96RS6 583 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 KCTD15Q96SI1 283 aaPredicted RBP5.33□□□□□ -1.56
RUFY3-201ENST00000226328 KRT12Q99456 494 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 ZSWIM1Q9BR11 485 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 FICDQ9BVA6 458 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 FRMD8Q9BZ67 464 aaPredicted RBP5.33□□□□□ -1.56
RUFY3-201ENST00000226328 ZFYVE1Q9HBF4 777 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 LNPEPQ9UIQ6 1025 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 TMEM59LQ9UK28 342 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 DRG1Q9Y295 367 aaKnown RBP5.33□□□□□ -1.56
RUFY3-201ENST00000226328 CACNA1HO95180 2353 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 APOC4-APOC2K7ER74 178 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 EPHB6O15197 1021 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 RRP8O43159 456 aaKnown RBP5.33□□□□□ -1.56
RUFY3-201ENST00000226328 PRAMEF11O60813 436 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 CNTN5O94779 1100 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 NDST3O95803 873 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 APOC2P02655 101 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 FGGP02679 453 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 JMJD7P0C870 316 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 CHRNB2P17787 502 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 HOXA6P31267 233 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 CD86P42081 329 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 FOXK2Q01167 660 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 MAP9Q49MG5 647 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 ALFQ53S48 1182 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 Q6ZNB5 142 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 C14orf80Q86SX3 495 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 CCDC25Q86WR0 208 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 LRRC8AQ8IWT6 810 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 KATNAL2Q8IYT4 538 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 APCDD1Q8J025 514 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 FAM160A2Q8N612 972 aaPredicted RBP5.33□□□□□ -1.56
RUFY3-201ENST00000226328 DENND6BQ8NEG7 585 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 FAM46DQ8NEK8 389 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 ARHGEF2Q92974 986 aaKnown RBP5.33□□□□□ -1.56
RUFY3-201ENST00000226328 MRGPRX1Q96LB2 322 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 SLC39A8Q9C0K1 460 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 CLPBQ9H078 707 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 ACBD3Q9H3P7 528 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 ITM2CQ9NQX7 267 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 TMPRSS4Q9NRS4 437 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 RAB6BQ9NRW1 208 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 APOBEC3BQ9UH17 382 aaKnown RBP5.33□□□□□ -1.56
RUFY3-201ENST00000226328 SNX10Q9Y5X0 201 aa5.33□□□□□ -1.56
RUFY3-201ENST00000226328 CCDC78A2IDD5 438 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms