RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 CRHR2Q13324 411 aa22.14■■□□□ 1.13
SMARCD2-201ENST00000225742 MTA1Q13330 715 aa22.14■■□□□ 1.13
SMARCD2-201ENST00000225742 PCSK7Q16549 785 aa22.14■■□□□ 1.13
SMARCD2-201ENST00000225742 PIGGQ5H8A4 983 aa22.14■■□□□ 1.13
SMARCD2-201ENST00000225742 MS4A13Q5J8X5 152 aa22.14■■□□□ 1.13
SMARCD2-201ENST00000225742 PEX13Q92968 403 aa22.14■■□□□ 1.13
SMARCD2-201ENST00000225742 HMCESQ96FZ2 354 aa22.14■■□□□ 1.13
SMARCD2-201ENST00000225742 BTN2A3PQ96KV6 586 aa22.14■■□□□ 1.13
SMARCD2-201ENST00000225742 CATSPER2Q96P56 530 aa22.14■■□□□ 1.13
SMARCD2-201ENST00000225742 FAM192AQ9GZU8 254 aa22.14■■□□□ 1.13
SMARCD2-201ENST00000225742 UTP6Q9NYH9 597 aaKnown RBP22.14■■□□□ 1.13
SMARCD2-201ENST00000225742 PCDHB5Q9Y5E4 795 aa22.14■■□□□ 1.13
SMARCD2-201ENST00000225742 FRMPD3Q5JV73 1810 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 MROH6A6NGR9 719 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 SORBS2O94875 1100 aaKnown RBP22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 LYNP07948 512 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 OR4Q2P0C623 313 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 ERFP50548 548 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 IL10RBQ08334 325 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 MAPRE2Q15555 327 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 TRIP4Q15650 581 aaPredicted RBP22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 CCSAPQ6IQ19 270 aaPredicted RBP22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 PCSK9Q8NBP7 692 aaKnown RBP22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 IFT43Q96FT9 208 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 BTBD9Q96Q07 612 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 TRMOQ9BU70 441 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 ATXN3LQ9H3M9 355 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 TRPC7Q9HCX4 862 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 MRPL40Q9NQ50 206 aaKnown RBP22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 NUDT5Q9UKK9 219 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 NOD1Q9Y239 953 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 SYN3O14994 580 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 IPO13O94829 963 aaKnown RBP22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 SLC10A3P09131 477 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 PIM1P11309 404 aaPredicted RBP22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 UQCRBP14927 111 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 CD86P42081 329 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 PGGT1BP53609 377 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 ART3Q13508 389 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 CSHL1Q14406 222 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 PDCD2Q16342 344 aaPredicted RBP22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 ZNF423Q2M1K9 1284 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 RBM20Q5T481 1227 aaKnown RBP22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 HECTD2Q5U5R9 776 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 CHSY3Q70JA7 882 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 SDCCAG8Q86SQ7 713 aaPredicted RBP22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 DLG3Q92796 817 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 RCN3Q96D15 328 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 MOCOSQ96EN8 888 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 UBXN10Q96LJ8 280 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 CDRT15Q96T59 188 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 HACD3Q9P035 362 aa22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 COPG1Q9Y678 874 aaKnown RBP22.13■■□□□ 1.13
SMARCD2-201ENST00000225742 FAM92AA1XBS5 289 aa22.12■■□□□ 1.13
SMARCD2-201ENST00000225742 DRGXA6NNA5 263 aa22.12■■□□□ 1.13
SMARCD2-201ENST00000225742 MMP2P08253 660 aa22.12■■□□□ 1.13
SMARCD2-201ENST00000225742 ITKQ08881 620 aa22.12■■□□□ 1.13
SMARCD2-201ENST00000225742 SREBF2Q12772 1141 aa22.12■■□□□ 1.13
SMARCD2-201ENST00000225742 BTG3Q14201 252 aaPredicted RBP22.12■■□□□ 1.13
SMARCD2-201ENST00000225742 PARP15Q460N3 678 aa22.12■■□□□ 1.13
SMARCD2-201ENST00000225742 NOMO2Q5JPE7 1267 aa22.12■■□□□ 1.13
SMARCD2-201ENST00000225742 PPM1LQ5SGD2 360 aa22.12■■□□□ 1.13
SMARCD2-201ENST00000225742 OGFRL1Q5TC84 451 aaPredicted RBP22.12■■□□□ 1.13
SMARCD2-201ENST00000225742 CILP2Q8IUL8 1156 aa22.12■■□□□ 1.13
SMARCD2-201ENST00000225742 COLGALT2Q8IYK4 626 aa22.12■■□□□ 1.13
SMARCD2-201ENST00000225742 PELI3Q8N2H9 469 aa22.12■■□□□ 1.13
SMARCD2-201ENST00000225742 OR13J1Q8NGT2 312 aa22.12■■□□□ 1.13
SMARCD2-201ENST00000225742 PIP4K2CQ8TBX8 421 aa22.12■■□□□ 1.13
SMARCD2-201ENST00000225742 OLFM1Q99784 485 aa22.12■■□□□ 1.13
SMARCD2-201ENST00000225742 WDR41Q9HAD4 459 aa22.12■■□□□ 1.13
SMARCD2-201ENST00000225742 MEAF6Q9HAF1 191 aa22.12■■□□□ 1.13
SMARCD2-201ENST00000225742 COMMD8Q9NX08 183 aa22.12■■□□□ 1.13
SMARCD2-201ENST00000225742 VWA7Q9Y334 891 aa22.12■■□□□ 1.13
SMARCD2-201ENST00000225742 LOC285095A0A1B0GVY8 99 aa22.11■■□□□ 1.13
SMARCD2-201ENST00000225742 F8W810 466 aa22.11■■□□□ 1.13
SMARCD2-201ENST00000225742 RTN3O95197 1032 aaPredicted RBP22.11■■□□□ 1.13
SMARCD2-201ENST00000225742 WISP3O95389 354 aaPredicted RBP22.11■■□□□ 1.13
SMARCD2-201ENST00000225742 FAM189BP81408 668 aa22.11■■□□□ 1.13
SMARCD2-201ENST00000225742 SLC10A7Q0GE19 358 aa22.11■■□□□ 1.13
SMARCD2-201ENST00000225742 SLC24A5Q71RS6 500 aa22.11■■□□□ 1.13
SMARCD2-201ENST00000225742 KDELC2Q7Z4H8 507 aa22.11■■□□□ 1.13
SMARCD2-201ENST00000225742 PPP1R36Q96LQ0 422 aa22.11■■□□□ 1.13
SMARCD2-201ENST00000225742 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.11■■□□□ 1.132e-11■■■■■ 64.9
SMARCD2-201ENST00000225742 ACSS2Q9NR19 701 aa22.11■■□□□ 1.13
SMARCD2-201ENST00000225742 GTSE1Q9NYZ3 720 aa22.11■■□□□ 1.13
SMARCD2-201ENST00000225742 GMIPQ9P107 970 aa22.11■■□□□ 1.13
SMARCD2-201ENST00000225742 G3BP2Q9UN86 482 aaKnown RBP22.11■■□□□ 1.13
SMARCD2-201ENST00000225742 A8MT66 165 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 J3KR12 359 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 ME2P23368 584 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 INHBCP55103 352 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 YBEYP58557 167 aaPredicted RBP22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 SULT2A1Q06520 285 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 SQLEQ14534 574 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 TRIP10Q15642 601 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 FAM45BPQ6NSW5 357 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 PQLC1Q8N2U9 271 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 SPATA6LQ8N4H0 392 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 CATSPER1Q8NEC5 780 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 FAM45AQ8TCE6 357 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms