RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 EPHA3P29320 983 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.59□□□□□ -0.55
NOD1-201ENST00000222823 TEX44Q53QW1 395 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 BNIPLQ7Z465 357 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 CDYL2Q8N8U2 506 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 SETD9Q8NE22 299 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 AGAP11Q8TF27 550 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 MAF1Q9H063 256 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 GLOD4Q9HC38 313 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 PACSIN3Q9UKS6 424 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 NFS1Q9Y697 457 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 C5orf60A6NFR6 353 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 ANKDD1BA6NHY2 528 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 BMP10O95393 424 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 C2P06681 752 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 MMP3P08254 477 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 CLTBP09497 229 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 UNGP13051 313 aaPredicted RBP11.59□□□□□ -0.55
NOD1-201ENST00000222823 COX4I1P13073 169 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 HGFP14210 728 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 COX7A2P14406 83 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 TARBP2Q15633 366 aaKnown RBP11.59□□□□□ -0.55
NOD1-201ENST00000222823 DEFB115Q30KQ5 88 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 SWT1Q5T5J6 900 aaKnown RBP11.59□□□□□ -0.55
NOD1-201ENST00000222823 TYW3Q6IPR3 259 aaKnown RBP11.59□□□□□ -0.55
NOD1-201ENST00000222823 ZCCHC8Q6NZY4 707 aaKnown RBP11.59□□□□□ -0.55
NOD1-201ENST00000222823 ADAMTSL2Q86TH1 951 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 CCDC103Q8IW40 242 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 PLD5Q8N7P1 536 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 TERB1Q8NA31 727 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 BHLHE22Q8NFJ8 381 aaPredicted RBP11.59□□□□□ -0.55
NOD1-201ENST00000222823 GPR152Q8TDT2 470 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 ATL1Q8WXF7 558 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 MTFMTQ96DP5 389 aaKnown RBP11.59□□□□□ -0.55
NOD1-201ENST00000222823 MARK4Q96L34 752 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 SEMA6AQ9H2E6 1030 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 GNPTGQ9UJJ9 305 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 ANAPC2Q9UJX6 822 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 AGO1Q9UL18 857 aaKnown RBP11.59□□□□□ -0.55
NOD1-201ENST00000222823 DUSP12Q9UNI6 340 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 AP3M1Q9Y2T2 418 aa11.59□□□□□ -0.55
NOD1-201ENST00000222823 MRPS23Q9Y3D9 190 aaKnown RBP11.59□□□□□ -0.55
NOD1-201ENST00000222823 MAFBQ9Y5Q3 323 aaPredicted RBP11.59□□□□□ -0.55
NOD1-201ENST00000222823 H3BN98 237 aa11.58□□□□□ -0.55
NOD1-201ENST00000222823 ENTPD5O75356 428 aa11.58□□□□□ -0.55
NOD1-201ENST00000222823 EPN2O95208 641 aa11.58□□□□□ -0.55
NOD1-201ENST00000222823 TCF3P15923 654 aa11.58□□□□□ -0.55
NOD1-201ENST00000222823 PSMA3P25788 255 aa11.58□□□□□ -0.55
NOD1-201ENST00000222823 ICAM3P32942 547 aa11.58□□□□□ -0.55
NOD1-201ENST00000222823 GABRB2P47870 512 aa11.58□□□□□ -0.55
NOD1-201ENST00000222823 PRKG2Q13237 762 aa11.58□□□□□ -0.55
NOD1-201ENST00000222823 MAPKAPK3Q16644 382 aa11.58□□□□□ -0.55
NOD1-201ENST00000222823 LIPMQ5VYY2 423 aa11.58□□□□□ -0.55
NOD1-201ENST00000222823 ARHGAP17Q68EM7 881 aa11.58□□□□□ -0.55
NOD1-201ENST00000222823 IRGCQ6NXR0 463 aa11.58□□□□□ -0.55
NOD1-201ENST00000222823 HJURPQ8NCD3 748 aaPredicted RBP11.58□□□□□ -0.55
NOD1-201ENST00000222823 SLCO2A1Q92959 643 aa11.58□□□□□ -0.55
NOD1-201ENST00000222823 FBXL18Q96ME1 805 aa11.58□□□□□ -0.55
NOD1-201ENST00000222823 APOL4Q9BPW4 351 aa11.58□□□□□ -0.55
NOD1-201ENST00000222823 RHOJQ9H4E5 214 aa11.58□□□□□ -0.55
NOD1-201ENST00000222823 RCOR3Q9P2K3 495 aaPredicted RBP11.58□□□□□ -0.55
NOD1-201ENST00000222823 BTBD19C9JJ37 291 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 FFAR3O14843 346 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 GPR42O15529 346 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 TREHO43280 583 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 HNRNPLP14866 589 aaKnown RBP eCLIP11.58□□□□□ -0.56
NOD1-201ENST00000222823 TNNI3P19429 210 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 PIK3R1P27986 724 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 GRK4P32298 578 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 CDH13P55290 713 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 PSME3P61289 254 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 FGD3Q5JSP0 725 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 CERCAMQ5T4B2 595 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 MARK2Q7KZI7 788 aaKnown RBP11.58□□□□□ -0.56
NOD1-201ENST00000222823 SLC26A9Q7LBE3 791 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 CAMK1DQ8IU85 385 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 SPATA6LQ8N4H0 392 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 ATAD1Q8NBU5 361 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 LMO3Q8TAP4 145 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 SEC14L1Q92503 715 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 C1QTNF7Q9BXJ2 289 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 ARMC7Q9H6L4 198 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 PAPOLBQ9NRJ5 636 aaKnown RBP11.58□□□□□ -0.56
NOD1-201ENST00000222823 ENOPH1Q9UHY7 261 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 SNX6Q9UNH7 406 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 KLHL20Q9Y2M5 609 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 SCN7AQ01118 1682 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 PEX10O60683 326 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 DLGAP3O95886 979 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 ADH1AP07327 375 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 HPCAL1P37235 193 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 GRIA3P42263 894 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 DUSP4Q13115 394 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 ITGA7Q13683 1181 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 NEDD8Q15843 81 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 INSCQ1MX18 579 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 EMC10Q5UCC4 262 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 SCIMPQ6UWF3 145 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 VSTM1Q6UX27 236 aa11.58□□□□□ -0.56
NOD1-201ENST00000222823 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 470.6 ms