RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 GSTK1Q9Y2Q3 226 aa10.62□□□□□ -0.71
TRPS1-201ENST00000220888 BTBD19C9JJ37 291 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 CDK18Q07002 472 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 SUZ12Q15022 739 aaKnown RBP10.61□□□□□ -0.71
TRPS1-201ENST00000220888 PUS10Q3MIT2 529 aaKnown RBP10.61□□□□□ -0.71
TRPS1-201ENST00000220888 CERCAMQ5T4B2 595 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 FAM35AQ86V20 835 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 PROSER1Q86XN7 944 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 PTGR2Q8N8N7 351 aaPredicted RBP10.61□□□□□ -0.71
TRPS1-201ENST00000220888 OR6K2Q8NGY2 324 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 SPATA9Q9BWV2 254 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 SEZ6LQ9BYH1 1024 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 FBXO6Q9NRD1 293 aaPredicted RBP10.61□□□□□ -0.71
TRPS1-201ENST00000220888 CLUHO75153 1309 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 SEPT4O43236 478 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 DUSP11O75319 330 aaKnown RBP10.61□□□□□ -0.71
TRPS1-201ENST00000220888 CDK14O94921 469 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 ACADSP16219 412 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 TAF10Q12962 218 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 CBFBQ13951 182 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 IRGCQ6NXR0 463 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 VSTM1Q6UX27 236 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 FAM183BPQ6ZVS7 135 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 ATCAYQ86WG3 371 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 NPAS4Q8IUM7 802 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 DEFB107AQ8IZN7 70 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 TRPV3Q8NET8 790 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 OR52K1Q8NGK4 314 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 CAPSLQ8WWF8 208 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 RAD51AP1Q96B01 352 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 BRINP2Q9C0B6 783 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 C11orf49Q9H6J7 331 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 PRDM8Q9NQV8 689 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 SEMA3GQ9NS98 782 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 FAM198AQ9UFP1 575 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 NCOA3Q9Y6Q9 1424 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 ASTN2O75129 1339 aaPredicted RBP10.61□□□□□ -0.71
TRPS1-201ENST00000220888 FPGTO14772 594 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 UGT2B4P06133 528 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 CCDC166P0CW27 439 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 ITGA2P17301 1181 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 BUD31P41223 144 aaPredicted RBP10.61□□□□□ -0.71
TRPS1-201ENST00000220888 HK2P52789 917 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 CASP9P55211 416 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 RPP38P78345 283 aaKnown RBP10.61□□□□□ -0.71
TRPS1-201ENST00000220888 GAD2Q05329 585 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 GPM6BQ13491 265 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 ZSWIM7Q19AV6 140 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 C15orf59Q2T9L4 293 aaPredicted RBP10.61□□□□□ -0.71
TRPS1-201ENST00000220888 FBXO42Q6P3S6 717 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 POMZP3Q6PJE2 187 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 RTL3Q8N8U3 475 aaKnown RBP10.61□□□□□ -0.71
TRPS1-201ENST00000220888 NELL1Q92832 810 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 CD101Q93033 1021 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 ZNF607Q96SK3 696 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 ACO2Q99798 780 aaKnown RBP10.61□□□□□ -0.71
TRPS1-201ENST00000220888 FNDC11Q9BVV2 318 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 THAP1Q9NVV9 213 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 CMTM6Q9NX76 183 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 CCDC167Q9P0B6 97 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 RPS6KA6Q9UK32 745 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 PRODHO43272 600 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 KIF1CO43896 1103 aaKnown RBP10.61□□□□□ -0.71
TRPS1-201ENST00000220888 ATG13O75143 517 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 TSC22D2O75157 780 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 PTENP60484 403 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 CCZ1BP86790 482 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 CCZ1P86791 482 aaPredicted RBP10.61□□□□□ -0.71
TRPS1-201ENST00000220888 NR1D2Q14995 579 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 BRMS1LQ5PSV4 323 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 SRFBP1Q8NEF9 429 aaKnown RBP10.61□□□□□ -0.71
TRPS1-201ENST00000220888 DDHD1Q8NEL9 900 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 CLP1Q92989 425 aaKnown RBP10.61□□□□□ -0.71
TRPS1-201ENST00000220888 TAPBPLQ9BX59 468 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 CCDC177Q9NQR7 707 aaPredicted RBP10.61□□□□□ -0.71
TRPS1-201ENST00000220888 CNGB3Q9NQW8 809 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 ARHGEF4Q9NR80 690 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 BTBD7Q9P203 1132 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 LGR5O75473 907 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 OTCP00480 354 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 ATP4AP20648 1035 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 CMPK1P30085 196 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 GALNT3Q14435 633 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 ATXN7L2Q5T6C5 722 aaPredicted RBP10.61□□□□□ -0.71
TRPS1-201ENST00000220888 C9orf64Q5T6V5 341 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 LRRC52Q8N7C0 313 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 FBXO25Q8TCJ0 367 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 UPF1Q92900 1129 aaKnown RBP eCLIP10.61□□□□□ -0.71
TRPS1-201ENST00000220888 PIGUQ9H490 435 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 MTRRQ9UBK8 725 aa10.61□□□□□ -0.71
TRPS1-201ENST00000220888 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.61□□□□□ -0.71
TRPS1-201ENST00000220888 EML1O00423 815 aa10.6□□□□□ -0.71
TRPS1-201ENST00000220888 FGF1P05230 155 aa10.6□□□□□ -0.71
TRPS1-201ENST00000220888 PIRTP0C851 137 aa10.6□□□□□ -0.71
TRPS1-201ENST00000220888 CORO1AP31146 461 aaKnown RBP10.6□□□□□ -0.71
TRPS1-201ENST00000220888 CDK16Q00536 496 aa10.6□□□□□ -0.71
TRPS1-201ENST00000220888 OLFML2BQ68BL8 750 aa10.6□□□□□ -0.71
TRPS1-201ENST00000220888 EXOC3L1Q86VI1 746 aa10.6□□□□□ -0.71
TRPS1-201ENST00000220888 FAM98AQ8NCA5 519 aaKnown RBP10.6□□□□□ -0.71
TRPS1-201ENST00000220888 ATP6V1C2Q8NEY4 427 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms