RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 TBC1D13Q9NVG8 400 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 CACNG4Q9UBN1 327 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 PCDHGB4Q9UN71 923 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 PCDHGB5Q9Y5G0 923 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 HEATR9A2RTY3 570 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 C17orf102A2RUQ5 167 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 E7ENX8 843 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 TRIM24O15164 1050 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 IRAK2O43187 625 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 HLA-DQB2P05538 268 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 LTA4HP09960 611 aaKnown RBP13.41□□□□□ -0.26
SRP54-201ENST00000216774 TCN1P20061 433 aaPredicted RBP13.41□□□□□ -0.26
SRP54-201ENST00000216774 RPL9P32969 192 aaKnown RBP13.41□□□□□ -0.26
SRP54-201ENST00000216774 LAMB3Q13751 1172 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 FASTKQ14296 549 aaKnown RBP13.41□□□□□ -0.26
SRP54-201ENST00000216774 CSHL1Q14406 222 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 MGAT5BQ3V5L5 792 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 IL23RQ5VWK5 629 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 BTBD8Q5XKL5 378 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 AFMIDQ63HM1 303 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 HACD2Q6Y1H2 254 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 ARHGAP22Q7Z5H3 698 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 ANKRD23Q86SG2 305 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 SLC22A9Q8IVM8 553 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 GALNT4Q8N4A0 578 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 C3orf58Q8NDZ4 430 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 HMGCLL1Q8TB92 370 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 EME1Q96AY2 570 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 MRGPRX2Q96LB1 330 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 ZNF597Q96LX8 424 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 TRMOQ9BU70 441 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 SLC39A8Q9C0K1 460 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 RBM22Q9NW64 420 aaKnown RBP eCLIP13.41□□□□□ -0.26
SRP54-201ENST00000216774 APPL1Q9UKG1 709 aa13.41□□□□□ -0.26
SRP54-201ENST00000216774 ARHGAP10A1A4S6 786 aa13.4□□□□□ -0.26
SRP54-201ENST00000216774 MEIS3P2A8K0S8 358 aa13.4□□□□□ -0.26
SRP54-201ENST00000216774 A8MT66 165 aa13.4□□□□□ -0.26
SRP54-201ENST00000216774 PMPCBO75439 489 aa13.4□□□□□ -0.26
SRP54-201ENST00000216774 PENKP01210 267 aaPredicted RBP13.4□□□□□ -0.26
SRP54-201ENST00000216774 LEPRP48357 1165 aaKnown RBP13.4□□□□□ -0.26
SRP54-201ENST00000216774 CPT1AP50416 773 aa13.4□□□□□ -0.26
SRP54-201ENST00000216774 ATXN3P54252 364 aaPredicted RBP13.4□□□□□ -0.26
SRP54-201ENST00000216774 NR1H2P55055 460 aa13.4□□□□□ -0.26
SRP54-201ENST00000216774 ACAP2Q15057 778 aa13.4□□□□□ -0.26
SRP54-201ENST00000216774 IRAK1BP1Q5VVH5 260 aa13.4□□□□□ -0.26
SRP54-201ENST00000216774 REP15Q6BDI9 236 aa13.4□□□□□ -0.26
SRP54-201ENST00000216774 FAM45BPQ6NSW5 357 aa13.4□□□□□ -0.26
SRP54-201ENST00000216774 FAM171BQ6P995 826 aa13.4□□□□□ -0.26
SRP54-201ENST00000216774 KLHDC10Q6PID8 442 aa13.4□□□□□ -0.26
SRP54-201ENST00000216774 CUZD1Q86UP6 607 aa13.4□□□□□ -0.26
SRP54-201ENST00000216774 FAM156AQ8NDB6 213 aa13.4□□□□□ -0.26
SRP54-201ENST00000216774 FAM45AQ8TCE6 357 aa13.4□□□□□ -0.26
SRP54-201ENST00000216774 ATP6V1E2Q96A05 226 aa13.4□□□□□ -0.26
SRP54-201ENST00000216774 HIC2Q96JB3 615 aa13.4□□□□□ -0.26
SRP54-201ENST00000216774 MPP4Q96JB8 637 aa13.4□□□□□ -0.26
SRP54-201ENST00000216774 RANBP9Q96S59 729 aa13.4□□□□□ -0.26
SRP54-201ENST00000216774 GAD1Q99259 594 aa13.4□□□□□ -0.26
SRP54-201ENST00000216774 PRPF18Q99633 342 aaKnown RBP13.4□□□□□ -0.26
SRP54-201ENST00000216774 ACBD6Q9BR61 282 aa13.4□□□□□ -0.26
SRP54-201ENST00000216774 SLC25A23Q9BV35 468 aa13.4□□□□□ -0.26
SRP54-201ENST00000216774 UNKQ9C0B0 810 aaKnown RBP13.4□□□□□ -0.26
SRP54-201ENST00000216774 ARNT2Q9HBZ2 717 aa13.4□□□□□ -0.26
SRP54-201ENST00000216774 CCL15-CCL14A0A0B4J2E2 113 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 A0A1B0GVG6 124 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 NEMP2A6NFY4 417 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 FBP2O00757 339 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 PAGE1O75459 146 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 SNRPB2P08579 225 aaKnown RBP13.39□□□□□ -0.27
SRP54-201ENST00000216774 ODC1P11926 461 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 PSMC3P17980 439 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 HOXC8P31273 242 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 CCR1P32246 355 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 C1QTNF8P60827 252 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 SEPT6Q14141 434 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 GK3PQ14409 553 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 CCL15Q16663 113 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 TMEM259Q4ZIN3 620 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 AGKQ53H12 422 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 CHERPQ8IWX8 916 aaKnown RBP13.39□□□□□ -0.27
SRP54-201ENST00000216774 PCDH20Q8N6Y1 951 aaKnown RBP13.39□□□□□ -0.27
SRP54-201ENST00000216774 UBXN10Q96LJ8 280 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 UHRF1Q96T88 793 aaPredicted RBP13.39□□□□□ -0.27
SRP54-201ENST00000216774 OLFM1Q99784 485 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 RTP3Q9BQQ7 232 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 KATNAL1Q9BW62 490 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 OSBPL11Q9BXB4 747 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 GRIP2Q9C0E4 1043 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 FAM105AQ9NUU6 356 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 THEGQ9P2T0 379 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 CD300AQ9UGN4 299 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 TCRBV3S1A0A5B6 114 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 ASLP04424 464 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 ATP6V1B1P15313 513 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 KCNA5P22460 613 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 BDNFP23560 247 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 SLC7A1P30825 629 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 SLC26A3P40879 764 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 CHRNA4P43681 627 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 ACADVLP49748 655 aa13.39□□□□□ -0.27
SRP54-201ENST00000216774 ATP4BP51164 291 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms