RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 TPI1P60174 286 aa15.16■□□□□ 0.02
UPK3A-201ENST00000216211 FANCCQ00597 558 aa15.16■□□□□ 0.02
UPK3A-201ENST00000216211 C1orf61Q13536 156 aa15.16■□□□□ 0.02
UPK3A-201ENST00000216211 PTK2BQ14289 1009 aa15.16■□□□□ 0.02
UPK3A-201ENST00000216211 TBC1D25Q3MII6 688 aa15.16■□□□□ 0.02
UPK3A-201ENST00000216211 GUSBP11Q6P575 273 aa15.16■□□□□ 0.02
UPK3A-201ENST00000216211 EFL1Q7Z2Z2 1120 aaKnown RBP15.16■□□□□ 0.02
UPK3A-201ENST00000216211 IRF2BP2Q7Z5L9 587 aa15.16■□□□□ 0.02
UPK3A-201ENST00000216211 PHACTR4Q8IZ21 702 aa15.16■□□□□ 0.02
UPK3A-201ENST00000216211 TP53I13Q8NBR0 393 aaPredicted RBP15.16■□□□□ 0.02
UPK3A-201ENST00000216211 BTN2A2Q8WVV5 523 aa15.16■□□□□ 0.02
UPK3A-201ENST00000216211 IL12RB2Q99665 862 aa15.16■□□□□ 0.02
UPK3A-201ENST00000216211 LRRC19Q9H756 370 aa15.16■□□□□ 0.02
UPK3A-201ENST00000216211 SPASTQ9UBP0 616 aa15.16■□□□□ 0.02
UPK3A-201ENST00000216211 DKK3Q9UBP4 350 aa15.16■□□□□ 0.02
UPK3A-201ENST00000216211 UBA2Q9UBT2 640 aaPredicted RBP15.16■□□□□ 0.02
UPK3A-201ENST00000216211 J3KR12 359 aa15.15■□□□□ 0.02
UPK3A-201ENST00000216211 ATMINO43313 823 aaPredicted RBP15.15■□□□□ 0.02
UPK3A-201ENST00000216211 USP12O75317 370 aa15.15■□□□□ 0.02
UPK3A-201ENST00000216211 GCATO75600 419 aa15.15■□□□□ 0.02
UPK3A-201ENST00000216211 CCDC172P0C7W6 258 aa15.15■□□□□ 0.02
UPK3A-201ENST00000216211 TGM2P21980 687 aa15.15■□□□□ 0.02
UPK3A-201ENST00000216211 XPAP23025 273 aaPredicted RBP15.15■□□□□ 0.02
UPK3A-201ENST00000216211 EIF4A3P38919 411 aaKnown RBP15.15■□□□□ 0.02
UPK3A-201ENST00000216211 ADKP55263 362 aaKnown RBP15.15■□□□□ 0.02
UPK3A-201ENST00000216211 YPEL5P62699 121 aa15.15■□□□□ 0.02
UPK3A-201ENST00000216211 IRF4Q15306 451 aa15.15■□□□□ 0.02
UPK3A-201ENST00000216211 TMEM52BQ4KMG9 183 aa15.15■□□□□ 0.02
UPK3A-201ENST00000216211 PRRT3Q5FWE3 981 aa15.15■□□□□ 0.02
UPK3A-201ENST00000216211 DNAAF5Q86Y56 855 aa15.15■□□□□ 0.02
UPK3A-201ENST00000216211 CELF6Q96J87 481 aaKnown RBP15.15■□□□□ 0.02
UPK3A-201ENST00000216211 C1QTNF7Q9BXJ2 289 aa15.15■□□□□ 0.02
UPK3A-201ENST00000216211 CPEB1Q9BZB8 566 aaKnown RBP15.15■□□□□ 0.02
UPK3A-201ENST00000216211 PRORYQ9H606 182 aa15.15■□□□□ 0.02
UPK3A-201ENST00000216211 PDFQ9HBH1 243 aa15.15■□□□□ 0.02
UPK3A-201ENST00000216211 SALL4Q9UJQ4 1053 aa15.15■□□□□ 0.02
UPK3A-201ENST00000216211 AP4E1Q9UPM8 1137 aa15.15■□□□□ 0.02
UPK3A-201ENST00000216211 PTPRQQ9UMZ3 2332 aa15.14■□□□□ 0.01
UPK3A-201ENST00000216211 EME2A4GXA9 379 aaPredicted RBP15.14■□□□□ 0.01
UPK3A-201ENST00000216211 EIF4E1BA6NMX2 242 aaKnown RBP15.14■□□□□ 0.01
UPK3A-201ENST00000216211 TPP1O14773 563 aa15.14■□□□□ 0.01
UPK3A-201ENST00000216211 CBFA2T2O43439 604 aa15.14■□□□□ 0.01
UPK3A-201ENST00000216211 DESP17661 470 aa15.14■□□□□ 0.01
UPK3A-201ENST00000216211 PSMA2P25787 234 aa15.14■□□□□ 0.01
UPK3A-201ENST00000216211 GABREP78334 506 aa15.14■□□□□ 0.01
UPK3A-201ENST00000216211 ELP6Q0PNE2 266 aa15.14■□□□□ 0.01
UPK3A-201ENST00000216211 MAMLD1Q13495 774 aa15.14■□□□□ 0.01
UPK3A-201ENST00000216211 NR0B2Q15466 257 aa15.14■□□□□ 0.01
UPK3A-201ENST00000216211 CA9Q16790 459 aa15.14■□□□□ 0.01
UPK3A-201ENST00000216211 PERM1Q5SV97 790 aa15.14■□□□□ 0.01
UPK3A-201ENST00000216211 FAXCQ5TGI0 409 aa15.14■□□□□ 0.01
UPK3A-201ENST00000216211 CRTC1Q6UUV9 634 aa15.14■□□□□ 0.01
UPK3A-201ENST00000216211 MACC1Q6ZN28 852 aa15.14■□□□□ 0.01
UPK3A-201ENST00000216211 PEBP4Q96S96 227 aa15.14■□□□□ 0.01
UPK3A-201ENST00000216211 SYT11Q9BT88 431 aa15.14■□□□□ 0.01
UPK3A-201ENST00000216211 LRRC61Q9BV99 259 aa15.14■□□□□ 0.01
UPK3A-201ENST00000216211 BOCQ9BWV1 1114 aa15.14■□□□□ 0.01
UPK3A-201ENST00000216211 SLC13A1Q9BZW2 595 aa15.14■□□□□ 0.01
UPK3A-201ENST00000216211 SLC39A8Q9C0K1 460 aa15.14■□□□□ 0.01
UPK3A-201ENST00000216211 CLPBQ9H078 707 aa15.14■□□□□ 0.01
UPK3A-201ENST00000216211 SUV39H2Q9H5I1 410 aa15.14■□□□□ 0.01
UPK3A-201ENST00000216211 DHX35Q9H5Z1 703 aaKnown RBP15.14■□□□□ 0.01
UPK3A-201ENST00000216211 NCKIPSDQ9NZQ3 722 aa15.14■□□□□ 0.01
UPK3A-201ENST00000216211 IFNKQ9P0W0 207 aa15.14■□□□□ 0.01
UPK3A-201ENST00000216211 PCSK1NQ9UHG2 260 aa15.14■□□□□ 0.01
UPK3A-201ENST00000216211 LRRC53A6NM62 1247 aa15.13■□□□□ 0.01
UPK3A-201ENST00000216211 EEF2KO00418 725 aaKnown RBP15.13■□□□□ 0.01
UPK3A-201ENST00000216211 TOR1BO14657 336 aa15.13■□□□□ 0.01
UPK3A-201ENST00000216211 MUSKO15146 869 aa15.13■□□□□ 0.01
UPK3A-201ENST00000216211 CASC3O15234 703 aaKnown RBP15.13■□□□□ 0.01
UPK3A-201ENST00000216211 BUB1BO60566 1050 aaPredicted RBP15.13■□□□□ 0.01
UPK3A-201ENST00000216211 PRAMEF11O60813 436 aa15.13■□□□□ 0.01
UPK3A-201ENST00000216211 PRKCGP05129 697 aa15.13■□□□□ 0.01
UPK3A-201ENST00000216211 ANXA6P08133 673 aa15.13■□□□□ 0.01
UPK3A-201ENST00000216211 C6P13671 934 aa15.13■□□□□ 0.01
UPK3A-201ENST00000216211 HTR7P34969 479 aa15.13■□□□□ 0.01
UPK3A-201ENST00000216211 RGRP47804 291 aa15.13■□□□□ 0.01
UPK3A-201ENST00000216211 PAPOLAP51003 745 aaKnown RBP15.13■□□□□ 0.01
UPK3A-201ENST00000216211 NDST2P52849 883 aa15.13■□□□□ 0.01
UPK3A-201ENST00000216211 PPARDQ03181 441 aa15.13■□□□□ 0.01
UPK3A-201ENST00000216211 TCEA2Q15560 299 aa15.13■□□□□ 0.01
UPK3A-201ENST00000216211 UGP2Q16851 508 aa15.13■□□□□ 0.01
UPK3A-201ENST00000216211 C6orf132Q5T0Z8 1188 aa15.13■□□□□ 0.01
UPK3A-201ENST00000216211 ARFGAP1Q8N6T3 406 aa15.13■□□□□ 0.01
UPK3A-201ENST00000216211 NAF1Q96HR8 494 aaKnown RBP15.13■□□□□ 0.01
UPK3A-201ENST00000216211 VCPIP1Q96JH7 1222 aa15.13■□□□□ 0.01
UPK3A-201ENST00000216211 ZNF578Q96N58 590 aaPredicted RBP15.13■□□□□ 0.01
UPK3A-201ENST00000216211 FCRL3Q96P31 734 aaPredicted RBP15.13■□□□□ 0.01
UPK3A-201ENST00000216211 UBL7Q96S82 380 aaPredicted RBP15.13■□□□□ 0.01
UPK3A-201ENST00000216211 KCTD15Q96SI1 283 aaPredicted RBP15.13■□□□□ 0.01
UPK3A-201ENST00000216211 SNRNP25Q9BV90 132 aaKnown RBP15.13■□□□□ 0.01
UPK3A-201ENST00000216211 XPO4Q9C0E2 1151 aaKnown RBP15.13■□□□□ 0.01
UPK3A-201ENST00000216211 PCDH12Q9NPG4 1184 aa15.13■□□□□ 0.01
UPK3A-201ENST00000216211 PARVAQ9NVD7 372 aa15.13■□□□□ 0.01
UPK3A-201ENST00000216211 TSPAN11A1L157 253 aa15.12■□□□□ 0.01
UPK3A-201ENST00000216211 ARHGAP42A6NI28 874 aa15.12■□□□□ 0.01
UPK3A-201ENST00000216211 ESPNB1AK53 854 aa15.12■□□□□ 0.01
UPK3A-201ENST00000216211 LMO7DNF2Z398 122 aa15.12■□□□□ 0.01
UPK3A-201ENST00000216211 RIOK3O14730 519 aaKnown RBP15.12■□□□□ 0.01
UPK3A-201ENST00000216211 YY2O15391 372 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms